BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN20319 (UTR included)
(5695 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01019A1B04 690 0.0
>BF01019A1B04
Length = 771
Score = 690 bits (348), Expect = 0.0
Identities = 422/448 (94%), Gaps = 14/448 (3%)
Strand = Plus / Plus
Query: 5248 gaagaattttattattgatgacaaatcgagtcagtaagacagtgtattgacttagatact 5307
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gaagaattttattattgatgacaaatcgagtcagtaagacagtgtattgacttagatact 60
Query: 5308 ccggaatacttcagaggaaaatagattaccgtattgaatgatcgctattgttgtggagat 5367
|||||||||||||||||| |||||||||||||| ||||||||||||| || ||| |||||
Sbjct: 61 ccggaatacttcagaggacaatagattaccgtactgaatgatcgctactgatgttgagat 120
Query: 5368 catgttatactggccacactaggaaaacaatcgaatcagccaatgaaacaagaaacccga 5427
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 121 catgttatactggccacactaggaaaacaatcgaatcagccaatgaaacaagaaacccta 180
Query: 5428 ctcactccacttattgacccgatgatatttattagtgggattccatttatattggctggt 5487
||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 181 ctcgctccacttattgacccgatgatatttattagtgggattctatttatattggctggt 240
Query: 5488 cattgttttattcccaacagagttcactctatgttggtctcgacccactttttctagaga 5547
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 cattgatttattcccaacagagttcactctatgttggtctcgacccactttttctagaga 300
Query: 5548 ttccatttaatgtcggcctgtaagacgtttcttaacgatttatgtagggctaaatgtttt 5607
||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 301 ttccatttaatgtcggcctgtaagacgtttc-------tttatgtagggctaaatgtttt 353
Query: 5608 tcactctccgctggtctaagtccatggcctatgcgattttataattttgttcgtaattta 5667
|| ||||| || ||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 354 tcgctctc-------ctgagtccgtggcctatgcgattttataattttgttcgtaattta 406
Query: 5668 actcgacttcatacaaatctacaatttt 5695
||||||||||||||||||||||||||||
Sbjct: 407 actcgacttcatacaaatctacaatttt 434
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 418,416
Number of extensions: 8637
Number of successful extensions: 8637
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 8637
Number of HSP's successfully gapped: 2
Length of query: 5695
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 5677
Effective length of database: 8,109,745
Effective search space: 46039022365
Effective search space used: 46039022365
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)