BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN20327 (UTR included)
(1795 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_1614_C2 1156 0.0
BF14_1614_C1 1059 0.0
>BF14_1614_C2
Length = 815
Score = 1156 bits (583), Expect = 0.0
Identities = 630/646 (97%), Gaps = 6/646 (0%)
Strand = Plus / Plus
Query: 1 ataagtgcgccttggacttgacggaattaaattgtttagtaactctaat------gttat 54
||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 170 ataagtgcgccttggacttgacggaattaaattgtttagtaactctaatagaaatgttat 229
Query: 55 tttacattattctttaattgatggaataactgattgttaccgacgttcggtttaagcttt 114
|||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||
Sbjct: 230 tttacattattctttaattgttggaataactgattgttaccgaggttcggtttaagcttt 289
Query: 115 aagcgaactaaacatagagttgaaactaactaaaactcaacacggtatcgtttgaatgat 174
|| ||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||
Sbjct: 290 aaacgaactaaacatagagttgaaactaaccaaaacttaacacggtatcgtttgaatgat 349
Query: 175 gactgacaataaacagcacgcgccgggacttgaaatattaaagcgagttcccttataacg 234
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 350 gactgacaataaacagcacgcgccgggacttgaaatattaaagcgagttcccttataacg 409
Query: 235 tacaatgtataaatatattttactttatctaaaataatatatttaatatattgggaacat 294
| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 410 tgcaatgtataaatatattttacttcatctaaaataatatatttaatatattgggaacat 469
Query: 295 ttggttttctcaattaaaataatattattatcgtataagtttttacgtacgctgtatatt 354
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 470 ttggttttctcaattaaaataatattattatcgtataagtttttacgtacgctgtatatt 529
Query: 355 ttattttgtatttaatatacatatacagacagttggtgtttcatatttgtttaaataata 414
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 530 ttattttgtatttaatatacatatacagacagttggtgtttcatatttgtttaaataata 589
Query: 415 aaatattatccgtattcttaaatagtttaggaataatgacgcttcctaagctatgaagca 474
||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||
Sbjct: 590 aaatattatccgtattcttaaatagtttaggaataatgatgctttctaagctatgaagca 649
Query: 475 gtttaaatacgtgttattaaatagttatgataattgtgtgtcagaaaacgggctccagac 534
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 650 gtttaaatacgtgttattaaatagttataataattgtgtgtcagaaaacgggctccagac 709
Query: 535 tgaagatcttctcaaacacggcgccccagagcacggagcgtgttgtgcagctcgtgggca 594
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 710 tgaagatcttctcaaacacggcgccccagagcacggagcgtgttgtgcagctcgtgggca 769
Query: 595 cggctacctccgtggctgacggcatcagggaggtgctccatctagt 640
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 770 cggctacctccgtggctgacggcatcagggaggtgctccatctagt 815
>BF14_1614_C1
Length = 1117
Score = 1059 bits (534), Expect = 0.0
Identities = 543/546 (99%)
Strand = Plus / Plus
Query: 517 agaaaacgggctccagactgaagatcttctcaaacacggcgccccagagcacggagcgtg 576
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 572 agaaaacgggctccagactgaagatcttctcaaacacggcgccccagagcacggagcgtg 631
Query: 577 ttgtgcagctcgtgggcacggctacctccgtggctgacggcatcagggaggtgctccatc 636
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 632 ttgtgcagctcgtgggcacggctacctccgtggctgacggcatcagggaggtgctccatc 691
Query: 637 tagtaagacaggtgccgatcaagggagccgtgcagaattacgatccacataattatgatg 696
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 692 tagtaagacaggtgccgatcaagggagccgtgcagaattacgacccacataattatgatg 751
Query: 697 atttctatgcggatgaatacggaggattcggcagcgggcaggggcctcgtggaggagggc 756
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 752 atttctatgcggatgaatacggaggattcggcagcgggcaggggcctcgtggaggagggc 811
Query: 757 cccggggaggaccaccgcgggggcctccgcgagggcccccaggtcctatgggtccaggag 816
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 812 cccggggaggaccaccgcgggggcctccgcgagggcccccaggtcctatgggtccaggag 871
Query: 817 gccgtccaccaccgcccagaggaggccctccgatgggtcgcaacgggcccccgagaccat 876
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 872 gccgtccaccaccgcccagaggaggccctccgatgggtcgcaacgggcccccgagaccat 931
Query: 877 tcaacgacttctcgggcccgggcccccgcggcaacttcaacggaccccctcgtgggaact 936
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 932 tcaacgacttctcgggcccgggcccccgcggcaacttcaacggaccccctcgtgggaact 991
Query: 937 ttggcggcggcggcggaggcggagttggcagtggcaacttcggtggtaacttcggcggca 996
|||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 992 ttggcggcggtggcggaggcggagttggcagtggcaacttcggtggtaacctcggcggca 1051
Query: 997 gcaaccgctcctcatcaggaggaaacttcaacagcaacggcggaaaccaacaggagacta 1056
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1052 gcaaccgctcctcatcaggaggaaacttcaacagcaacggcggaaaccaacaggagacta 1111
Query: 1057 ccacac 1062
||||||
Sbjct: 1112 ccacac 1117
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 227,519
Number of extensions: 5763
Number of successful extensions: 5763
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 5763
Number of HSP's successfully gapped: 3
Length of query: 1795
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1778
Effective length of database: 8,119,229
Effective search space: 14435989162
Effective search space used: 14435989162
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)