BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN20328 (UTR included)
(1786 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01031A1F10 858 0.0
>BF01031A1F10
Length = 703
Score = 858 bits (433), Expect = 0.0
Identities = 470/482 (97%), Gaps = 4/482 (0%)
Strand = Plus / Plus
Query: 447 gcaaacaaagtaaaacaaatgtataataaactaattagcaagctacaaccggatatgatt 506
||||||||||||||| |||||||||||||| ||||||||||||||||||| |||||||||
Sbjct: 226 gcaaacaaagtaaaagaaatgtataataaattaattagcaagctacaaccagatatgatt 285
Query: 507 aaggaaactcatgataagtacaatgtaagcgatacttcttcagtaagaaatctgtcacaa 566
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 286 aaggaaactcatgataagtacaatgtaagcgatacttcttcagtaagaaatctgtcacaa 345
Query: 567 gcttactttgagtcaactatatttgatcatgctggtgtcagtggcgggaacaactctgat 626
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 346 gcttactttgagtcaactatatttgatcatgctggtgtcagtggcgggaacaactctgat 405
Query: 627 aagcccctgaagtgcaaaattaaggatcaatattttcttatccctgaacagagtagattc 686
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 406 aagcccctgaagtgcaaaattaaggatcaatattttcttatccctgaacaga----attc 461
Query: 687 ttatgtggagatgtaagcgaccaatgtagaaagcttattggtaataaatatgacattatt 746
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 462 ttatgtggagatgtaagcaaccaatgtagaaagcttattggtaataaatatgacattatt 521
Query: 747 gtagctgaccctccttggtggaataagtatatacgaagactgaagggagctaatgaaaag 806
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 522 gtagctgaccctccttggtggaataaatatatacgaagactgaagggagctaatgaaaag 581
Query: 807 ctcggctattcaatgatgtacaatgaagatatcgctgatataccagttaaggagctcatg 866
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 582 ctcggctattcaatgatgtacaatgaagatatcgctgatattccagttaaggagctcatg 641
Query: 867 tccgagaactgcttggttgctgtatggtgtaccaatgcacccagcaatataactgctgtt 926
||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 642 tccgagaactgtttggttgctgtgtggtgtaccaatgcacccagcaatataactgctgtt 701
Query: 927 aa 928
||
Sbjct: 702 aa 703
Score = 113 bits (57), Expect = 1e-24
Identities = 63/65 (96%)
Strand = Plus / Plus
Query: 1 tgatagtagcaatgaagtagtttcaaagaaaaggcctcgaataagtacagaaatcattga 60
|||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 162 tgatagtagcaaagaggtagtttcaaagaaaaggcctcgaataagtacagaaatcattga 221
Query: 61 cgatg 65
|||||
Sbjct: 222 cgatg 226
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 242,391
Number of extensions: 4768
Number of successful extensions: 4768
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 4767
Number of HSP's successfully gapped: 2
Length of query: 1786
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1769
Effective length of database: 8,119,229
Effective search space: 14362916101
Effective search space used: 14362916101
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)