BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN20339 (UTR included)
(1927 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01009B1D04 1281 0.0
BF01046A1H05 84 1e-15
>BF01009B1D04
Length = 743
Score = 1281 bits (646), Expect = 0.0
Identities = 676/686 (98%)
Strand = Plus / Plus
Query: 8 taataatatgaattatattaatgtagagagtgcttcataaattctgctttaatagatgta 67
|||||||||||||||||||||||||||||||||||||| |||||||| |||||||||| |
Sbjct: 58 taataatatgaattatattaatgtagagagtgcttcattaattctgccttaatagatgaa 117
Query: 68 gttaattttctaaacatccacaatcaataatccagaaatcatgaagattctattacaact 127
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 118 gttaattttctaaacatccaaaatcaataatccagaaatcatgaagattctattacaact 177
Query: 128 aaatcgattatctaatacactaataaaaaactatagcaccgcaccaaaatctctgtcggt 187
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 178 aaatcgattatctaatacactaataaaaaactatagcaccgcaccaaaatctctgtcggt 237
Query: 188 tttacgtgtcggtgaaaaagattatcctacagatgactacacaaacgtgacaccaaaaat 247
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 238 tttacgtgtcggtgaaaaagattatcctacagatgactacacaaacgtgacaccaaaaat 297
Query: 248 aatatcgtatttaaatcgcaacttacatttaaaaaaagataatccgctttcgttagtccg 307
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 298 aatatcgtatttaaatcgcaacttacatttaaaaaaagataatccgctttcgttagtccg 357
Query: 308 acaacgaatagtgaactatttttacaaatcctttacaaatagaggcaatccgttattcag 367
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 358 acaacgaatagtgaactatttttacaaatcctttacaaatagaggcaatccgttattcag 417
Query: 368 cgtgtatgataatttacctcctgtggtcactacaaagcaaaactttgacgatttattaat 427
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 418 tgtgtatgataatttacctcctgtggtcactacaaagcaaaactttgatgatttattaat 477
Query: 428 acccgaagaccatccaagtaggacaaaatctgattgctattatgtaaacagatctgtatt 487
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 478 acccgaagaccatccaagtaggacaaaatctgattgctattatgtgaacagatctgtatt 537
Query: 488 actccgagctcacatgacggctcatcaaactgaattgctcagatcaggtcttgataactt 547
|||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 538 actccgagctcatatgacggctcatcaaactgaattgctcagatcaggtctagataactt 597
Query: 548 cctgatgatcggagatgtgtatagaagagatgaaatagattcaactcattttcctgtttt 607
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 598 cctgatgatcggagatgtgtatagaagagatgaaatagattcaactcattttcctgtttt 657
Query: 608 tcaccaagttgatgctgtgagatctcaactcagagagcaactttttgagaatcatcccga 667
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 658 tcaccaagttgatgccgtgagatctcaactcagagagcaactttttgagaatcatcccga 717
Query: 668 cctgaacatcttcgaaccaatatacg 693
||||||||||||||||||||||||||
Sbjct: 718 cctgaacatcttcgaaccaatatacg 743
>BF01046A1H05
Length = 918
Score = 83.8 bits (42), Expect = 1e-15
Identities = 66/74 (89%)
Strand = Plus / Minus
Query: 1639 aaagttcttagtctctagtcgcagccttgttcattcacaaatccctctttacatagttca 1698
|||| ||||||||||||||||| |||||||| ||||||||||||||| |||| ||||||
Sbjct: 229 aaagctcttagtctctagtcgcgaccttgttctttcacaaatccctctctacacagttca 170
Query: 1699 gtataatatcggcg 1712
|| |||||| ||||
Sbjct: 169 gtttaatattggcg 156
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 274,216
Number of extensions: 6419
Number of successful extensions: 6419
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 6419
Number of HSP's successfully gapped: 2
Length of query: 1927
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1910
Effective length of database: 8,119,229
Effective search space: 15507727390
Effective search space used: 15507727390
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)