BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN20353 (UTR included)
(4525 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01013A1B09 1227 0.0
>BF01013A1B09
Length = 678
Score = 1227 bits (619), Expect = 0.0
Identities = 645/654 (98%)
Strand = Plus / Plus
Query: 2983 cgttcaaaccgatacctaactacacgccagcctcagaaataaacggttcaattaacagtc 3042
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cgttcaaaccgatacctaactacacgccagcctcagaaataaacggttcaattaacagtc 60
Query: 3043 atccgccgatacattacaaactagttgccatacacataccgcgtcctgattacacggata 3102
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 61 atccgccgatacattacaaactagttgccatacacataccacgtcctgattacacggata 120
Query: 3103 tcaaaaatagcacagcgaaatcacaagcactgacggatcctaggttaaggaaagtattca 3162
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 121 tcaaaaatagcacagcgaaatcacaagcactgactgatcctaggttaaggaaagtattca 180
Query: 3163 gattgtccgtagaagaaactaatagtgacagtgaaaaaccagcgaaagttgtaaatacag 3222
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gattgtccgtagaggaaactaatagtgacagtgaaaaaccagcgaaagttgtaaatacag 240
Query: 3223 ggccccgagtggaccccagacggaaacctaaagatcaaatcgataccactagtcaagaac 3282
| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gcccccgagtggaccccaggcggaaacctaaagatcaaatcgataccactagtcaagaac 300
Query: 3283 aaaaatctaactcattagaattacagacgatattacaaaattcaaattggtacaaagatt 3342
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 aaaaatccaactcattagaattacagacgatattacaaaattcaaattggtacaaagatt 360
Query: 3343 tgagttccacacagaagatattcgtgaatcagaatctagcaccggtgacgcagatgataa 3402
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 361 tgagttccacacagaagatattcgtgaatcagaatctagcgccggtgacgcagatgataa 420
Query: 3403 aacaacaccatcaggaaaagcaaatgggtaagaaatttgatataggttcaatacaaaaca 3462
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 aacaacaccatcaggaaaagcaaatgggtaagaaatttgatataggttcaatacaaaaca 480
Query: 3463 ataacgttctgtgtagcatattcactaatctaggcgtgactcttggagaaaacggtgagt 3522
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 ataacgttctgtgtagcatattcactaatctaggcgtgactcttggagaaaacggtgagt 540
Query: 3523 tctcgtatttacctaaaccgaaggaggctctgctgaagactccgataggctttagtcaga 3582
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 tctcgtatttacctaaaccgaaggaggctctgctgaagactccgataggctttagtcaga 600
Query: 3583 attcaaatcctttcggcatgaacaacatgtccggaggccatgggcctatggagg 3636
||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 attngaatcctttcggcatgaacaacatgtccggaggccatgggcctatggagg 654
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 570,706
Number of extensions: 13469
Number of successful extensions: 13469
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 13469
Number of HSP's successfully gapped: 1
Length of query: 4525
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 4507
Effective length of database: 8,109,745
Effective search space: 36550620715
Effective search space used: 36550620715
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)