BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN20354 (UTR included)
(2623 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01029A2F04 609 e-174
>BF01029A2F04
Length = 777
Score = 609 bits (307), Expect = e-174
Identities = 335/346 (96%), Gaps = 3/346 (0%)
Strand = Plus / Minus
Query: 1638 ccaagtgaagcgtacgtcaaacgtgatgacgtcagaatcgctgatacagaatataaacca 1697
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 777 ccaagtgaagcgtacgtcaaacgtgatgacgtcagaatcgctgatacagaatatannnnn 718
Query: 1698 tccgacatagatattaataacgatagcattaagattgataaaataaatataaaatatccg 1757
||||||||||||||||||||||||| ||||||| ||||||||||||||||| |||||
Sbjct: 717 nccgacatagatattaataacgatagnattaaga---ataaaataaatataaaacatccg 661
Query: 1758 gacaaatataggactgaatgcggcgtggaattttacctacctaaattgacgagtcacatt 1817
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 660 gacaaatataggactgaatgcggcgtggaattttacctacctaaattgacgagtcacatt 601
Query: 1818 gttagttcagcatttattagccccataggacgatacagcaaaagcatcatggttacaaaa 1877
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 600 gttagttcagcatttattagccccataggacgatacagcaaaagcatcatggttacaaaa 541
Query: 1878 agagtgctgacagcatttaatcattaccctttagccagcatcggttcgtccggcatcccg 1937
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 540 agagtgctgacagcatttaatcattaccctttagccagcatcggttcgtccggcatcccg 481
Query: 1938 ggatgggcggcgccctttaaagaagtgcaactcaatcattacaagg 1983
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 480 ggatgggcggcgccctttaaagaagtgcaactcaatcattacaagg 435
Score = 295 bits (149), Expect = 2e-79
Identities = 149/149 (100%)
Strand = Plus / Minus
Query: 1981 aggaatcatgcaattcaactatagtggaggactgcgacttgtactccaggggaacgaaac 2040
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 171 aggaatcatgcaattcaactatagtggaggactgcgacttgtactccaggggaacgaaac 112
Query: 2041 tcgatcgctcggctttgagattaagtgaaaagctgttggaagccctatcatcagcgttct 2100
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 111 tcgatcgctcggctttgagattaagtgaaaagctgttggaagccctatcatcagcgttct 52
Query: 2101 gctcaaaattaaacattatataagcaaaa 2129
|||||||||||||||||||||||||||||
Sbjct: 51 gctcaaaattaaacattatataagcaaaa 23
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 310,931
Number of extensions: 6259
Number of successful extensions: 6259
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 6257
Number of HSP's successfully gapped: 2
Length of query: 2623
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2606
Effective length of database: 8,119,229
Effective search space: 21158710774
Effective search space used: 21158710774
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)