BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN20356 (UTR included)
(4081 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_2213_C1 1124 0.0
>BF14_2213_C1
Length = 1151
Score = 1124 bits (567), Expect = 0.0
Identities = 579/583 (99%)
Strand = Plus / Plus
Query: 3499 ctaacacggaacttaaggagcgtatagaagcgtggattgcagaacagaaacaaaatatta 3558
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13 ctaacacggaacttaaggagcgtatagaagcgtggattgcagaacagaaacaaaatatta 72
Query: 3559 cgaaacctgatactgctatgtaaaatcatttaaacaataccaatttacatttctagtcac 3618
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 73 cgaaacctgatactgctatgtaaaatcatttaaacaataccaatttacatttctagtcac 132
Query: 3619 ttcggtcacatataaaatgattaatttaaagtcatagtgttgccattacaataaattctc 3678
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 133 ttcggtcacatataaaatgattaatttaaagtcatagtgttgccattacaataaattctc 192
Query: 3679 tttagtttccatttattgttattgaatttaattctttatcactatagtgatattttaaat 3738
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 193 tttagtttccatttattgttattgaatttaattctttatcactatagtgatattttaaat 252
Query: 3739 tttatatggaattatttcatataatttttgaatactatttgctcaattacctaacaagcg 3798
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 253 tttatatggaattattttatataatttttgaatactatttgctcaattacctaacaagcg 312
Query: 3799 ttcagttaagagttgtcaactacttctgcttcgttatacttaccaatacattaatagatt 3858
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 ttcagttaagagttgccaactacttctgcttcgttatacttaccaatacattaatagatc 372
Query: 3859 cgggatggaagctataacatccacttaatagggaaacatgaaacagaatacttaatattg 3918
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 373 cgggatggaagctataacatccacttaatagggaaacatgaaacacaatacttaatattg 432
Query: 3919 aatgtatcatgcaaattatataaccaaaagttatcaaaattgttgaaatttgaattataa 3978
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 aatgtatcatgcaaattatataaccaaaagttatcaaaattgttgaaatttgaattataa 492
Query: 3979 ctatagattacacttctcttagtacatacataatattcatacaaaaaatcggtagctata 4038
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 493 ctatagattacacttctcttagtacatacataatattcatacaaaaaatcggtagctata 552
Query: 4039 tattattattaaactctaaaagaatataaggatgttatgtgaa 4081
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 553 tattattattaaactctaaaagaatataaggatgttatgtgaa 595
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 478,211
Number of extensions: 9631
Number of successful extensions: 9631
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 9631
Number of HSP's successfully gapped: 1
Length of query: 4081
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 4063
Effective length of database: 8,109,745
Effective search space: 32949893935
Effective search space used: 32949893935
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)