BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN20369 (UTR included)
(2294 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01058A1A04 1249 0.0
>BF01058A1A04
Length = 864
Score = 1249 bits (630), Expect = 0.0
Identities = 671/688 (97%)
Strand = Plus / Plus
Query: 47 gtgtatctactaaggactttatggcaaagttaggcgagtatttaatattaacagcatttt 106
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 177 gtgtatctactaaggactttatggcaaagttaggcgagtatttaatattaacagcatttt 236
Query: 107 ctcataattgtcgacacgagagggcgttcaaatgcttaggatctaatttaacagaattct 166
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 237 ctcataattgtcgacacgagagggcgttcaaatgcttaggatctaatttaacagaattct 296
Query: 167 taacaactttggacagtgttcatgacgttttacatgatcaggatgatgccttaaaagatg 226
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 297 taactactttggacagtgttcatgacgttttacatgatcaggatgatgccttaaaagatg 356
Query: 227 aatcgtcggagaatgaagcagctttcgtctgcacgacatcggatgctggtagaatacaac 286
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 357 aatcgtcggagaatgaagcagctttcgtctgcacgacatcggatgctggcagaatacaac 416
Query: 287 tgcatttaactaccgagagtgaaccagtcgcatacttattagtgggaagtctgaaggcaa 346
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 417 tgcatttaactactgagagtgaaccagtcgcatacttattagtgggaagtctgaaggcaa 476
Query: 347 tcgccattaagctatatgacacacagacggatataagactgatgagctattcaaacgatc 406
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 477 tcgccattaagctatatgatacacagacggatataagactgatgagctattcaaacgatc 536
Query: 407 cgaggagatttaggtatgatataagttccataccgttacaccagagatcaaaggaggata 466
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 537 cgaggagatttaggtatgatataagttccataccgttacaccagagatcaaaggaggata 596
Query: 467 attgtcaggcaacgagcgatgctgtaattcttgcgtcatctaacaaagtgaatgatctca 526
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 597 attgtcaggcaacgagcgatgctgtaattcttgcgtcatctaacaaagtgaatgatctca 656
Query: 527 agatcggcgtcgcaagcttttgcaaagcgtttccctggcatttcattactgataagcgtt 586
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 657 agatcggcgtcgcaagcttttgcaaagcgtttccctggcatttcattactgataagcgac 716
Query: 587 tagagctcgtacaactcggtggaggtttcatgcgtttgttcggaacgcatctatcttcac 646
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 717 tagagctcgtacaactcggtggaggtttcatgcgtttgttcggaacgcatctatcttcac 776
Query: 647 acgggtcgtcacttgggacttacttcaggttgttacgacctaggggtgtccccctagact 706
||||||||||||| |||||||| |||||||||||||||||||||||||||||
Sbjct: 777 acgggtcgtcactnnnnacttacttnnnnnngttacgacctaggggtgtccccctagact 836
Query: 707 tccgcgagatcctcaaacgcctaaacac 734
||||||||||| ||||||||||||||||
Sbjct: 837 tccgcgagatcttcaaacgcctaaacac 864
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 241,954
Number of extensions: 4191
Number of successful extensions: 4191
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 4191
Number of HSP's successfully gapped: 1
Length of query: 2294
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2277
Effective length of database: 8,119,229
Effective search space: 18487484433
Effective search space used: 18487484433
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)