BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN20378 (UTR included)
(2761 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01005A2E11 1140 0.0
BF14_328_C1 708 0.0
>BF01005A2E11
Length = 657
Score = 1140 bits (575), Expect = 0.0
Identities = 595/602 (98%), Gaps = 6/602 (0%)
Strand = Plus / Plus
Query: 998 agtcttgatagagggcgtgctgttcagagcccgttatctaggctccacccaattggcgtg 1057
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 56 agtcttgatagagggcgtgctgttcagagctcgttatctaggctccacccaattggcgtg 115
Query: 1058 tgaaggtcaaccgaccaaagctacaaggatgctgcaagctgaagaagctgtgtctcggat 1117
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 116 tgaaggtcaaccgaccaaagctacaaggatgctgcaagctgaagaagctgtgtctcggat 175
Query: 1118 caagtggggctgcgagggaccctactcgggggtgtacgcggcacccgcggccgtgttccg 1177
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 176 caagtggggctgcgagggaccctactcgggggtgtacgcggcacccgcggccgtgttccg 235
Query: 1178 cctctcattcctcggctccgtcgaggtcgacgaggactcgagacggcggaagaggagacc 1237
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 236 cctctcattcctcggctccgtcgaggtcgacgaggactcgagacggcggaagaggagacc 295
Query: 1238 caaaaagaatatggtcgaggaggccgtcaccaaaattaaggc------tccagaaggtga 1291
|||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 296 caaaaagaatatggtcgaggaggccgtcaccaaaattaaggccttggctccagaaggtga 355
Query: 1292 aaatcagccgagcaccgaagttgatcttttcatatcaactgagaagattatggtccttaa 1351
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 356 aaatcagccgagcaccgaagttgatcttttcatatcaactgagaagattatggtccttaa 415
Query: 1352 cactgagttgaaggaaataatgatggatcatgctttgagaacgatatcttatatagctga 1411
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 416 cactgagttgaaggaaataatgatggatcatgctttgagaacgatatcttatatagctga 475
Query: 1412 tataggggacctggttgtgttgatggcaaggagacggtttgtaccccacgagaatgattc 1471
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 476 tataggggacctggttgtgttgatggcaaggagacggtttgtaccccacgagaatgattc 535
Query: 1472 cgatcaaccaaaattgaaccgtacgcctaagatgatatgtcatgttttcgaaagcgaaga 1531
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 536 cgatcaaccaaaattgaaccgtacgcctaagatgatatgtcatgttttcgaaagcgaaga 595
Query: 1532 ggcccagttcatagctcagtccataggccaagctttccaagttgcgtatatggagttctt 1591
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 596 ggcccagttcatagctcagtccataggccaagctttccaagttgcgtatatggagttctt 655
Query: 1592 ga 1593
||
Sbjct: 656 ga 657
>BF14_328_C1
Length = 805
Score = 708 bits (357), Expect = 0.0
Identities = 372/377 (98%)
Strand = Plus / Plus
Query: 437 tgagaaacaaccacatgttcatacagtcgtatttggtgtgcgttatgagaattactatac 496
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 tgagaaacaaccacatgttcatacagtcgtatttggtgtgcgttatgagaattactatac 61
Query: 497 gaaaatgaatgttgaggttgaggtacatcgtgaggatgacgatgactccgatagaaaaga 556
|||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||
Sbjct: 62 gaaaatgaatgttgaggttgaggtacatcgtgaggatgacgatgactccgttacaaaaga 121
Query: 557 tgataatgatgtgctcggtttaaacgttaacgaaaatgacacctccgaccagggctcttg 616
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 122 tgataatgatgtgctcggtttaaacgttaacgaaaatcacacctccgaccagggctcttg 181
Query: 617 ttttctaagtgtcgaaacagaatataaaacaaaatttaattcaaacgatgaaataagtaa 676
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 ttttctaagtgtcgaaacagaatataaaacaaaatttaattcaaacgatgaaataagtaa 241
Query: 677 agctggttgtaaagaaaacgttcgcgatacaatcactgtggaaggaagtgatgtattaag 736
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 agatggttgtaaagaaaacgttcgcgatacaatcactgtggaaggaagtgatgtattaag 301
Query: 737 tgattcagtgagtgactcgagtcaaagtgacgacgctgatgaggatcatgtcaaaagtga 796
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 tgattcagtgagtgactccagtcaaagtgacgacgctgatgaggatcatgtcaaaagtga 361
Query: 797 aacaataaaaaataagg 813
|||||||||||||||||
Sbjct: 362 aacaataaaaaataagg 378
Score = 529 bits (267), Expect = e-150
Identities = 267/267 (100%)
Strand = Plus / Plus
Query: 855 ggctggcgtaaacctaagtctcgtactgtgatgccgtcgggtgggtcaagggacgctcat 914
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 ggctggcgtaaacctaagtctcgtactgtgatgccgtcgggtgggtcaagggacgctcat 437
Query: 915 gatgatcacagggaagacgaagtgcataatggaaaggataaggacgggaaaaagaaaagc 974
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 gatgatcacagggaagacgaagtgcataatggaaaggataaggacgggaaaaagaaaagc 497
Query: 975 aagaacaaggaagattgggccgcagtcttgatagagggcgtgctgttcagagcccgttat 1034
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 498 aagaacaaggaagattgggccgcagtcttgatagagggcgtgctgttcagagcccgttat 557
Query: 1035 ctaggctccacccaattggcgtgtgaaggtcaaccgaccaaagctacaaggatgctgcaa 1094
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 558 ctaggctccacccaattggcgtgtgaaggtcaaccgaccaaagctacaaggatgctgcaa 617
Query: 1095 gctgaagaagctgtgtctcggatcaag 1121
|||||||||||||||||||||||||||
Sbjct: 618 gctgaagaagctgtgtctcggatcaag 644
Score = 307 bits (155), Expect = 5e-83
Identities = 164/166 (98%), Gaps = 2/166 (1%)
Strand = Plus / Plus
Query: 1275 aaggctccagaaggtgaaaatcagccgagcaccgaagttgatcttttcatatcaactgag 1334
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 642 aaggctccagaaggtgaaaatcagccgagcaccgaagttgatcttttcatatcaactgag 701
Query: 1335 aagattatggtccttaacactgagttgaaggaaataatgatggatcatgctttgagaacg 1394
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 702 aagattatggtccttaacactgagttgaaggaaataatgatggatcatgctttgagaacg 761
Query: 1395 atatcttatatagctgatataggggacctggttgtgttgatggcaa 1440
|||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 762 atatcttatatagctg--ataggggacctggttgtgttgatggcaa 805
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 319,501
Number of extensions: 6775
Number of successful extensions: 6775
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 6774
Number of HSP's successfully gapped: 5
Length of query: 2761
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2744
Effective length of database: 8,119,229
Effective search space: 22279164376
Effective search space used: 22279164376
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)