BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN20381 (UTR included)
(1096 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01025A1A06 904 0.0
BF01036X1B05 230 4e-60
>BF01025A1A06
Length = 779
Score = 904 bits (456), Expect = 0.0
Identities = 459/460 (99%)
Strand = Plus / Plus
Query: 637 tatttatgtgatcgatcctgatatcaagaatagagtcggatgtaatagactaagattctt 696
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27 tatttatgtgatcgatcctgatatcaagaatagagtcggatgtaatagactaagattctt 86
Query: 697 atttcaaagtcttaaaaacttagatacaagtctacgtaaaattaacactcgattatatgt 756
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 87 atttcaaagtcttaaaaacttagatacaagtctacgtaaaattaacactcgattatatgt 146
Query: 757 tataaaaggcaaagctattgaatgtttaccaaaactatttgacgagtggcacgttaaatt 816
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 147 tataaaaggcaaagctattgaatgtttaccaaaactatttgacgagtggcacggtaaatt 206
Query: 817 tttaactctgcaagttgatattgacgcagatttagtgaaacaggatgaggttattgaaga 876
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 tttaactctgcaagttgatattgacgcagatttagtgaaacaggatgaggttattgaaga 266
Query: 877 attctgtgaagcaaacaacattttcgtggttaaaagaatgcaacatactgtatacgattt 936
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 attctgtgaagcaaacaacattttcgtggttaaaagaatgcaacatactgtatacgattt 326
Query: 937 taatagtgtggtaaagaaaaacaatggcagcattccactcacatatcaaaagtttctttc 996
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 taatagtgtggtaaagaaaaacaatggcagcattccactcacatatcaaaagtttctttc 386
Query: 997 gttagtctctgatgtgcaagttaaagacatcatacaaatatccaagggtgtgtctgatga 1056
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 gttagtctctgatgtgcaagttaaagacatcatacaaatatccaagggtgtgtctgatga 446
Query: 1057 gtgcaaagcaagtgattatgattcccaaggatatgacatt 1096
||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 gtgcaaagcaagtgattatgattcccaaggatatgacatt 486
>BF01036X1B05
Length = 780
Score = 230 bits (116), Expect = 4e-60
Identities = 140/146 (95%), Gaps = 2/146 (1%)
Strand = Plus / Minus
Query: 1 tgaaaatgaaaaggttggataaggttggtatttgttaaaacg-gcattgtaccaaaaaaa 59
|||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||
Sbjct: 146 tgaaaatgaaaaggttggataaggttggcatttgttaaaannngcattgtaccaaaaaaa 87
Query: 60 aaattaaaagtgtttt-agctgataaataaaccctttaaataatttaaataatagtattg 118
||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 86 aaattaaaagtattttgagctgataaataaaccctttaaataatttaaataatagtattg 27
Query: 119 gttttttactgtttgtttaccgttgc 144
||||||||||||||||||||||||||
Sbjct: 26 gttttttactgtttgtttaccgttgc 1
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 192,859
Number of extensions: 4685
Number of successful extensions: 4685
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 4683
Number of HSP's successfully gapped: 2
Length of query: 1096
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1079
Effective length of database: 8,119,229
Effective search space: 8760648091
Effective search space used: 8760648091
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)