BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN20383 (UTR included)
(2008 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01036X1B05 1457 0.0
BF01019B1G10 180 6e-45
>BF01036X1B05
Length = 780
Score = 1457 bits (735), Expect = 0.0
Identities = 770/780 (98%), Gaps = 2/780 (0%)
Strand = Plus / Plus
Query: 244 gcaacggtaaacaaacagtaaaaaaccaatactattatttaaattatttaaagggtttat 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gcaacggtaaacaaacagtaaaaaaccaatactattatttaaattatttaaagggtttat 60
Query: 304 ttatcagct-aaaacacttttaattttttttttggtacaatgccg-ttttaacaaatacc 361
||||||||| |||| |||||||||||||||||||||||||||| ||||||||||| ||
Sbjct: 61 ttatcagctcaaaatacttttaattttttttttggtacaatgcnnnttttaacaaatgcc 120
Query: 362 aaccttatccaaccttttcattttcagtatttaattcgttataatgtgaacatctacact 421
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aaccttatccaaccttttcattttcagtatttaattcgttataatgtgaacatctacact 180
Query: 422 atgacttaacaatatatttttttatttatgtgttttatttaatgtggtgtgtttaggttt 481
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 181 atgacttaacaatatatttttttatttttgtgttttatttaatgtggtgtgtttaggttt 240
Query: 482 agaaatatgacacctaaacatgcctaaagttattgaattaaccattgaaatagaaataca 541
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 agaaatatgacacctaaacatgcctaaagttattgaattaaccattgaaatagaaataca 300
Query: 542 aaaggtgtcatgtccgggtgtatggttgtgtcaagatgggcgcgtttctctcacagtgtt 601
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 aaaggtgtcatgtccgggtgtatggttgtgtcaagatgggcgcgtttctctcacagtgtt 360
Query: 602 tgctcttggtactagctaccaaacttgcctgctacctcctgtttttcccttacccttcag 661
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tgctcttggtactagctaccaaacttgcctgctacctcctgtttttcccttacccttcag 420
Query: 662 agatgtgttctattttcgaaaacgatttcaagaaagttgtgctctaaataacatctgttg 721
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 agatgtgttctattttcgaaaacgatttcaagaaagttgtgctctaaataacatctgttg 480
Query: 722 cttactgaaggatgaaacgatatattgtgaactggtccaatggtgcgaggattgtaattt 781
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 481 cttactgaaggatgaaacgatatattgtgaattggtccaatggtgcgaggattgtaattt 540
Query: 782 aagcgactgtgtgatcctggcacagtacttgggtgctatgaacgatgtgctcttcccccc 841
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 aagcgactgtgtgatcctggcacagtacttgggtgctatgaacgatgtgctcttcccccc 600
Query: 842 taacatgtgttcaaccgacggcgtcgacttactcatgagaagatccaaggaattcccagg 901
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 601 taacatgtgttcaaccgacggtgtcgacttactcatgagaagatccaaggaattcccagg 660
Query: 902 tatcctgtctcctaaaatcgaaatagcaacaaaagttcgtattgacgaagtttggaatct 961
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 tatcctgtctcctaaaatcgaaatagcaacaaaagttcgtattgacgaagtttggaatct 720
Query: 962 accctgcaatttgttaagtactacgaaggcgaaagactgtcattgttcgccgccaaatac 1021
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 721 accctgcaatttgttaagtactacgaaggcgaangactgtcattgttcgccgccaaatac 780
>BF01019B1G10
Length = 488
Score = 180 bits (91), Expect = 6e-45
Identities = 91/91 (100%)
Strand = Plus / Plus
Query: 639 cctgtttttcccttacccttcagagatgtgttctattttcgaaaacgatttcaagaaagt 698
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cctgtttttcccttacccttcagagatgtgttctattttcgaaaacgatttcaagaaagt 60
Query: 699 tgtgctctaaataacatctgttgcttactga 729
|||||||||||||||||||||||||||||||
Sbjct: 61 tgtgctctaaataacatctgttgcttactga 91
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 318,665
Number of extensions: 8153
Number of successful extensions: 8153
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 8151
Number of HSP's successfully gapped: 2
Length of query: 2008
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1991
Effective length of database: 8,119,229
Effective search space: 16165384939
Effective search space used: 16165384939
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)