BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN20385 (UTR included)
(3005 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_1663_C1 2426 0.0
>BF14_1663_C1
Length = 1264
Score = 2426 bits (1224), Expect = 0.0
Identities = 1254/1264 (99%)
Strand = Plus / Plus
Query: 319 taatcgtatttaattgcctaccactgtgctagtgtgccagaatgaaataataacttaata 378
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 taatcgtatttaattgcctaccactgtgctagtgtgccagaatgaaataataacttaata 60
Query: 379 aattacaaatactaaaaattttccttttgtctttgatacttagcgactatttaaattagg 438
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 61 aattacaaatactaaaaattttccttttgtctttgatacttagtgactatttaaattagg 120
Query: 439 ttacttgtaaataaggtttcgctatattatattctgcaccgaatttgcaagcttagagaa 498
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ttacttgtaaataaggtttcgctatattatattctgcaccgaatttgcaagcttagagaa 180
Query: 499 aaatgggggtaccgaagttttttagatacaccagtgaacggtatccttgtcttaatgagt 558
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 aaatgggggtaccgaagttttttagatacaccagtgaacggtatccttgtcttaatgagt 240
Query: 559 tagttaagcagtatcagattccagattttgacaacatgtacctggatatgaatggaatca 618
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tagttaagcagtatcagattccagattttgacaacatgtacctggatatgaatggaatca 300
Query: 619 tacacaactgttctcatcctgatgattccaatccacatttccgtatcacggaagagaaaa 678
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 301 tacacaactgttctcatcctgatgattccaatccacatttccgtatcacggaagagaaga 360
Query: 679 tattcaaagacatattccattacatcagcattttgtttcaaattattaagcccaagaagc 738
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tattcaaagacatattccattacatcagcattttgtttcaaattattaagcccaagaagc 420
Query: 739 tattttttatggctatcgatggtgtagccccaagagctaaaatgaatcagcagaggggaa 798
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tattttttatggctatcgatggtgtagccccaagagctaaaatgaatcagcagaggggaa 480
Query: 799 ggaggttccgatcagcaagggaagctgaaaagttagaggaaactgctaaagaaaagggtg 858
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 ggaggttccgatcagcaagggaagctgaaaagttagaggaaactgctaaagaaaagggtg 540
Query: 859 aggctctaccgacggaaaagaggtttgatagcaactgtatcactcccggaacagtgttca 918
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 541 aggctctaccgacggaaaagaggtttgatagcaactgtatcacgcccggaacagtgttca 600
Query: 919 tggctcgtcttcatgaacagctcaaatattttatcaaagagaagatatcaacggaccctc 978
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 tggctcgtcttcatgaacagctcaaatattttatcaaagagaagatatcaacggaccctc 660
Query: 979 tttggtccaaagttaaagttattctgtccggacatgagacgcccggtgaaggagaacaca 1038
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 tttggtccaaagttaaagttattctgtccggacatgagacgcccggtgaaggagaacaca 720
Query: 1039 aaataatggattacattcgctgggctcgctcgcagcccgactatgatcccagcaccagac 1098
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 aaataatggattacattcgctgggctcgctcgcagcccgactatgatcccagcaccagac 780
Query: 1099 actgcttgtatggactcgatgcagacctcattatgttaggagtttgcacacacgaaccac 1158
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 781 actgcttgtatggactcgatgcagacctcattatgctaggagtttgcacacacgaaccac 840
Query: 1159 actttgccttgctgcgagaagaggttaaatttggcaaaacaactcaaagggcaaccagcc 1218
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 841 actttgccttgctgcgagaagaggttaaatttggcaaaacaactcaaagggcaaccagcc 900
Query: 1219 ccgaagaaactaatttctacttgctccacctatcactactaagggaatatttggagcagg 1278
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 901 ccgaagaaactaatttctacttgctccacctatcactactaagggaatatttggagcagg 960
Query: 1279 aattcatatccatcaaggataatctgccattcccttacgatattgaaaatattattgacg 1338
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 961 aattcatatccatcaaggataatctgccattcccttacgatattgaaaatattattgacg 1020
Query: 1339 attgggttctcatggggttcttagtgggcaatgattttataccaaacttgcccaacatgc 1398
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1021 actgggttctcatggggttcttagtgggcaatgattttataccaaacttgcccaacatgc 1080
Query: 1399 atatcagcaatgacgctctgccgctcctgtacaaaacatacatgactgtcctgcctactt 1458
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1081 atatcagcaacgacgctctgccgctcctgtacaaaacatacatgactgtcctgcctactt 1140
Query: 1459 tggacggctatataaatgaatcgggagatttgaatttagggaggtttgaagtattcatgc 1518
|||||||||||||||||||||||||||||||||| ||| | ||||||||||| |||||||
Sbjct: 1141 tggacggctatataaatgaatcgggagatttgaacttacgaaggtttgaagtgttcatgc 1200
Query: 1519 aggagctggctaagattgataaagagaaatttcaagacacttatgccgacttgaaatact 1578
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1201 aggagctggctaagattgataaagagaaatttcaagacacttatgccgacttgaaatact 1260
Query: 1579 ttga 1582
||||
Sbjct: 1261 ttga 1264
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 340,667
Number of extensions: 7006
Number of successful extensions: 7006
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 7005
Number of HSP's successfully gapped: 1
Length of query: 3005
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 2987
Effective length of database: 8,109,745
Effective search space: 24223808315
Effective search space used: 24223808315
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)