BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN20388 (UTR included)
(1774 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01022A2H10 1281 0.0
BF01038A2G03 860 0.0
>BF01022A2H10
Length = 654
Score = 1281 bits (646), Expect = 0.0
Identities = 652/654 (99%)
Strand = Plus / Plus
Query: 467 gtgtatcaattattcttaatacctgttaacaaacatggctcgtcgttatgatacgagaac 526
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gtgtatcaattattcttaatacctgttaacaaacatggctcgtcgttatgatacgagaac 60
Query: 527 tacaatcttttcgcctgaaggtagattataccaagttgaatatgccatggaagctatcag 586
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tacaatcttttcgccggaaggtagattataccaagttgaatatgccatggaagctatcag 120
Query: 587 ccatgctggaacttcccttggtattttagccactgacggaattctgttggcagcagaaag 646
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ccatgctggaacttcccttggtattttagccactgacggaattctgttggcagcagaaag 180
Query: 647 aagaaacacaaataaacttttagatgaagtgttcttttctgaaaaaatttataaattgaa 706
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 aagaaacacaaataaacttttagatgaagtgttcttttctgaaaaaatttataaattgaa 240
Query: 707 tgatgacatggtatgctctgttgccggtatcacttctgatgcgaatgtcctaactaatga 766
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tgatgacatggtatgctctgttgccggtatcacttctgatgcgaatgtcctaactaatga 300
Query: 767 actgcgtctgattgctcagaggtatcttttgcaatatggtgaatccataccatgtgaaca 826
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 actgcgtctgattgctcagaggtatcttttgcaatatggtgaatccataccatgtgaaca 360
Query: 827 attggtttcatggctctgtgatgttaaacaggcatacacacagtatggaggtaaaagacc 886
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 attggtttcatggctctgtgatgttaaacaggcatacacacagtatggaggtaaaagacc 420
Query: 887 atttggtgtatcaatcctatacatgggttgggacaagcactatggttaccaactctacca 946
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 atttggtgtatcaatcctatacatgggttgggacaagcactatggttaccaactctacca 480
Query: 947 gtctgatcccagcggtaactatggagggtggaaggccacttgcattgggaataatagtgc 1006
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 gtctgatcccagcggcaactatggagggtggaaggccacttgcattgggaataatagtgc 540
Query: 1007 tgccgctgtttcaagtcttaagcaggagtacaaggaaaatgaaactactttagccgaagc 1066
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 tgccgctgtttcaagtcttaagcaggagtacaaggaaaatgaaactactttagccgaagc 600
Query: 1067 tcaggctctagccatcaaagttctcagcaagacattggatatgacaaaactttc 1120
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 tcaggctctagccatcaaagttctcagcaagacattggatatgacaaaactttc 654
>BF01038A2G03
Length = 827
Score = 860 bits (434), Expect = 0.0
Identities = 459/466 (98%), Gaps = 1/466 (0%)
Strand = Plus / Plus
Query: 416 ggcaaagcgaagctgtttttacgaacatattaaaattgatctgattacaaagtgtatcaa 475
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggcaaagcgaagctgtttttacgaacatattaaaattgatctgattacaaagtgtatcaa 60
Query: 476 ttattcttaatacctgttaacaaacatggctcgtcgttatgatacgagaactacaatctt 535
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ttattcttaatacctcttaacaaacatggctcgtcgttatgatacgagaactacaatctt 120
Query: 536 ttcgcctgaaggtagattataccaagttgaatatgccatggaagctatcagccatgctgg 595
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ttcgccggaaggtagattataccaagttgaatatgccatggaagctatcagccatgctgg 180
Query: 596 aacttcccttggtattttagccactgacggaattctgttggcagcagaaagaagaaacac 655
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 aacttcacttggtattttagccactgacggaattctgttggcagcagaaagaagaaacac 240
Query: 656 aaataaacttttagatgaagtgttcttttctgaaaaaatttataaattgaatgatgacat 715
|||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 241 aaataaacttctagatgaagtgttcttttctgaaaaaatttat-aattgaatgatgacat 299
Query: 716 ggtatgctctgttgccggtatcacttctgatgcgaatgtcctaactaatgaactgcgtct 775
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 300 ggtatgctctgttgccggtatcacttctgatgcaaatgtcctaactaatgaactgcgtct 359
Query: 776 gattgctcagaggtatcttttgcaatatggtgaatccataccatgtgaacaattggtttc 835
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 gattgctcagaggtatctcttgcaatatggtgaatccataccatgtgaacaattggtttc 419
Query: 836 atggctctgtgatgttaaacaggcatacacacagtatggaggtaaa 881
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 atggctctgtgatgttaaacaggcatacacacagtatggaggtaaa 465
Score = 460 bits (232), Expect = e-129
Identities = 235/236 (99%)
Strand = Plus / Plus
Query: 875 aggtaaaagaccatttggtgtatcaatcctatacatgggttgggacaagcactatggtta 934
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 592 aggtaaaagaccatttggtgtatcaatcctatacatgggttgggacaagcactatggtta 651
Query: 935 ccaactctaccagtctgatcccagcggtaactatggagggtggaaggccacttgcattgg 994
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 652 ccaactctaccagtctgatcccagcggcaactatggagggtggaaggccacttgcattgg 711
Query: 995 gaataatagtgctgccgctgtttcaagtcttaagcaggagtacaaggaaaatgaaactac 1054
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 712 gaataatagtgctgccgctgtttcaagtcttaagcaggagtacaaggaaaatgaaactac 771
Query: 1055 tttagccgaagctcaggctctagccatcaaagttctcagcaagacattggatatga 1110
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 772 tttagccgaagctcaggctctagccatcaaagttctcagcaagacattggatatga 827
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 292,653
Number of extensions: 7978
Number of successful extensions: 7978
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 7977
Number of HSP's successfully gapped: 3
Length of query: 1774
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1757
Effective length of database: 8,119,229
Effective search space: 14265485353
Effective search space used: 14265485353
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)