BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN20407 (UTR included)
(2425 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_1649_C1 1376 0.0
>BF14_1649_C1
Length = 754
Score = 1376 bits (694), Expect = 0.0
Identities = 706/710 (99%)
Strand = Plus / Plus
Query: 1110 atcggtataatcggaggctctgggttcgatgacccagatctatttgaaaatccaataccc 1169
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 45 atcggtataatcggaggctctgggttcgatgacccagatctatttgaaaatccaataccc 104
Query: 1170 cgtgatgtcgacactccattcgggaagccctcggacgttcttctagaaggatctattaaa 1229
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 105 cgtgatgtcgacactccattcgggaaaccctcggacgttcttctagaaggatctattaaa 164
Query: 1230 ggagtgtcttgcgtcctattagcgagacacggaagaaaacaccagtatcaaccgagcgat 1289
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 165 ggagtgtcttgcgtcctattagcgagacacggaagaaaacaccagtatcaaccgagcgat 224
Query: 1290 gtcaattaccgagctaatatttgggcgttgaaacaaattggctgtacacatatattggcc 1349
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 225 gtcaattaccgagctaatatttgggcgttgaaacaaattggctgtacacatatattggcc 284
Query: 1350 actaccgccactggatcgcttgtagaaaattaccggcccggggatcttgttatactggac 1409
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 285 actaccgccactggatcgcttgtagaaaattaccggcccggggatcttgttatactggac 344
Query: 1410 gatttcattgacagaacatggggtcgtaagtgtacgttcttcgacggcacatcgggtgga 1469
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 345 gatttcattgacaggacatggggtcgtaagtgtacgttcttcgacggcacatcgggtgga 404
Query: 1470 ccccgcggggtgtgccatttacccatgaggccggcgttctgtgagcgggcgaggggggct 1529
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 405 ccccgcggggtgtgccatttacccatgaggccggcgttctgtgagcgggcgaggggggct 464
Query: 1530 ctcgtgacggccgcgaacgaggcggggctacgctgtcacgagcgagggactgcggtcact 1589
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 465 ctcgtgacggccgcgaacgaggcggggctacgctgtcacgagcgagggactgcggtcact 524
Query: 1590 atacagggaccgagattctcaagtcgagctgagagtctgatgcatcgtcagtggggagcg 1649
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 525 atacaaggaccgagattctcaagtcgagctgagagtctgatgcatcgtcagtggggagcg 584
Query: 1650 cacgtagtcaacatgaccaccgtaccggaggtggtgttggctaaggaagctgggttgagc 1709
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 585 cacgtagtcaacatgaccaccgtaccggaggtggtgctggctaaggaagctgggttgagc 644
Query: 1710 tacgccgcggtggctctggtcaccgactatgactgctggagagacaacgagcagtcggtg 1769
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 645 tacgccgcggtggctctggtcaccgactatgactgctggagagacaacgagcagtcggtg 704
Query: 1770 tcagtgagcgaggtgctggagatgttcgcgaggaacattaagaaggcgat 1819
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 705 tcagtgagcgaggtgctggagatgttcgcgaggaacattaagaaggcgat 754
Score = 87.7 bits (44), Expect = 8e-17
Identities = 44/44 (100%)
Strand = Plus / Plus
Query: 270 tagctttaattcctattaaaatggccgagaaaagaaatataaag 313
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tagctttaattcctattaaaatggccgagaaaagaaatataaag 44
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 277,395
Number of extensions: 5582
Number of successful extensions: 5582
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 5582
Number of HSP's successfully gapped: 2
Length of query: 2425
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2408
Effective length of database: 8,119,229
Effective search space: 19551103432
Effective search space used: 19551103432
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)