BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN20413 (UTR included)
(1966 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_2825_C1 1368 0.0
>BF14_2825_C1
Length = 1895
Score = 1368 bits (690), Expect = 0.0
Identities = 708/714 (99%)
Strand = Plus / Plus
Query: 518 ttacaaactattggatcgtttcaagtccatagtggccggattcactgacagttacgcttt 577
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 528 ttacaaactattggatcgtttcaagtccatagtggccggattcactgacagttatgcttt 587
Query: 578 agccgccgataaatgcaagtccacggtgaagtcggtgtcattgagaatgttggcacgagt 637
|||||||||||||||||||||||||||||| |||||||| || |||||||||||||||||
Sbjct: 588 agccgccgataaatgcaagtccacggtgaaatcggtgtcgttaagaatgttggcacgagt 647
Query: 638 tctgctcgatgccgattccttgtcagtggatagcgctcttgatagagcgacagcggctta 697
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 648 tctgctcgatgccgattccttgtcagtggatagcgctcttgatagagcgacagcggctta 707
Query: 698 tagaattgttgaacatttagctcaaggtgaacaacaggaggttggggctggcggtgaagg 757
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 708 tagaattgttgaacatttagctcaaggtgaacaacaggaggttggggctggcggtgaagg 767
Query: 758 caccagcaaagatatggtcgagacagctcgccagtgggccaggccggtacacactgagct 817
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 768 caccagcaaagatatggtcgagacagctcgccagtgggccaggccggtacacactgagct 827
Query: 818 agaggcgctagctaacctcaagaaactattagaaagacagaacacattccgtcctgtgtt 877
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 828 agaggcgctagctaacctcaagaaactattagaaagacagaacacattccgtcctgtgtt 887
Query: 878 tgcaccgctactgagactggccaatcctgaaaggaaaagagtcactcaactacgaagact 937
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 888 tgcaccgctactgagactggccaatcctgaaaggaaaagagtcactcaactacgaagact 947
Query: 938 tttagcggatggagggtttttatatgacacactcaaggaagcatggcaggaacaacaggt 997
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 948 tttagcggacggagggtttttatatgacacactcaaggaagcatggcaggaacaacaggt 1007
Query: 998 tgctggtctagagaagcagttgtcttcattaacagtttcagcaaacgagagcgacattaa 1057
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1008 tgctggtctagagaagcagttgtcttcattaacagtttcagcaaacgagagcgacattaa 1067
Query: 1058 ggagttgattgaaatcttcgactgtcactttgacccggccaaagaacccaaagcaccgag 1117
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 1068 ggagttgattgaaatcttcgactgtcacttcgacccggccaaagaacccaaagcaccgag 1127
Query: 1118 acccagagcaacaaacaaagtcaggagctcgtcgtcagcgggtgaggctgagggcagttc 1177
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1128 acccagagcaacaaacaaagtcaggagctcgtcgtcagcgggtgaggctgagggcagttc 1187
Query: 1178 cagcgaatcacagaagacatcagtacataactcacctaacaagactaataatga 1231
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1188 cagcgaatcacagaagacatcagtacataactcacctaacaagactaataatga 1241
Score = 1128 bits (569), Expect = 0.0
Identities = 605/619 (97%), Gaps = 11/619 (1%)
Strand = Plus / Plus
Query: 1348 gaagccccggcagagctgagtcagccctcggagggggagaactgatgacacaagctttca 1407
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1240 gaagccccggcagagctgagtcagccctcggagggggagaactgatgacacaagctttca 1299
Query: 1408 tcacacgccgctgggtgacaccggcggatgtgacgtcacacttgtatacatggatgtgac 1467
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1300 tcacacgccgctgggtgacaccggcggatgtgacgtcacacttgtatacatggatgtgac 1359
Query: 1468 gtcacggacatataaataagtcatcccggtcggagtttttgcatgcatcagcgaacgaga 1527
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1360 gtcacggacatataaataagtcatcccggtcggagtttttgcatgcatcagcgaacgaga 1419
Query: 1528 gtttacatcgtataatttgttttgtttatagtttcggtcgttaacaatgtcggttcaaac 1587
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1420 gtttacatcgtataatttgttttgtttatagtttcggtcgttaacaatgtcggttcaaac 1479
Query: 1588 gcttggataaattttatatgatatacataatatagatcgtaatgtaggtgagtgccttag 1647
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1480 gcttggataaattttatatgatatacataatatagatcgtaatgtaggtgagtgccttag 1539
Query: 1648 caactcagtcgtttaagaatattcacacttttgtgtagtggccgtcggctggcaacaggc 1707
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1540 caactcagtggtttaagaatattcacacttttgtgtagtggccgtcggctggcaacaggc 1599
Query: 1708 gccttagtacgggtccgcggcgacactgcacacggacagttcacagtttgggactatgaa 1767
||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 1600 gccttaggacgggtccgcggcgacactgcacacggacagttcacagttt----------- 1648
Query: 1768 ggggaactggtaacgctccgtgtgcagtgtggccgcgcacgcgtggtagtgctgttgata 1827
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1649 gaggaactggtaacgctccgtgtgcagtgtggccgcgcacgcgtggtagtgctgttgata 1708
Query: 1828 caccgtctatacttaacggtgttttttttatatcagaggtaatatttatcgtttactcgc 1887
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1709 caccgtctatacttaacggtgttttttttatatcagaggtaatatttatcgtttactcgc 1768
Query: 1888 tttataatcgcaaagtaccatcattattatttattattgtttttattaaagagtagaagt 1947
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1769 tttataatcgcaaagtaccatcattattatttattattgtttttattaaagagtagaagt 1828
Query: 1948 atttattttgtgtgcaatc 1966
|||||||||||||||||||
Sbjct: 1829 atttattttgtgtgcaatc 1847
Score = 135 bits (68), Expect = 3e-31
Identities = 68/68 (100%)
Strand = Plus / Plus
Query: 58 caaacttttcttggtctttctaataagaatattaggaaaaaatattcaagtttcagcata 117
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 caaacttttcttggtctttctaataagaatattaggaaaaaatattcaagtttcagcata 60
Query: 118 cttcaaca 125
||||||||
Sbjct: 61 cttcaaca 68
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 242,401
Number of extensions: 5206
Number of successful extensions: 5206
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 5204
Number of HSP's successfully gapped: 4
Length of query: 1966
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1949
Effective length of database: 8,119,229
Effective search space: 15824377321
Effective search space used: 15824377321
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)