BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN20416 (UTR included)
(1618 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01014B1A10 1582 0.0
>BF01014B1A10
Length = 822
Score = 1582 bits (798), Expect = 0.0
Identities = 816/822 (99%)
Strand = Plus / Plus
Query: 414 cactgtgtggtttattaaatgttagtctacttataaaataaaatgggtcagaaagatgat 473
||||||||||||| |||||||||||| | |||||||||||||||||||||||||||||||
Sbjct: 1 cactgtgtggttttttaaatgttagttttcttataaaataaaatgggtcagaaagatgat 60
Query: 474 atttatcaaaaatttcaactgagacctatgaaatgtgaacttaattttcttagcagatct 533
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 atttatcaaaaatttcaactgagacctatgaaatgtgaacttaattttcttagcagatct 120
Query: 534 gatggttcggcgatcttatctcaaggtgaaactgtggtcacagtaagtgttaatggtcca 593
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gatggttcggcgatcttatctcaaggtgaaactgtggtcacagtaagtgttaatggtcca 180
Query: 594 ttggacatcaagacaactagccagagtatagagaaggcgactcttgaaattctgttcagt 653
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ttggacatcaagacaactagccagagtatagagaaggcgactcttgaaattctgttcagt 240
Query: 654 agcaagggagggaaaccgtcagttgctgatcggtttaaagaaaatgtaatcagacagaca 713
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 agcaagggagggaaaccctcagttgctgatcggtttaaagaaaatgtaatcagacagaca 300
Query: 714 tgtgaaacagctatattgggttgcctgtatcctcggaccggaataacgattacaatacaa 773
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tgtgaaacagctatattgggttgcctgtatcctcggaccggaataacgattacaatacaa 360
Query: 774 gaattagaagactatggagggctcctttcctgtgcaatcaactgtgcatgtctagctctt 833
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gaattagaagactatggagggctcctttcctgtgcaatcaactgtgcatgtctagctctt 420
Query: 834 ctcaacagtggtatatcgttacatcacgtagtggcagccgtcagttgtattgtggatgaa 893
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 421 ctcaacagtggtatatcgttacatcacgtagtggcagccgtcagttgcattgtggatgaa 480
Query: 894 actggaaatattgtactggaaccttcatatcagcaggttcagtcggccacaacaaaattg 953
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 actggaaatattgtactggaaccttcatatcagcaggttcagtcggccacaacaaaattg 540
Query: 954 tactttgtgtttgatagcagagataagaatctcgttacaggtttcactgagggtgctgtc 1013
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 541 tactttgtgtttgatagcagagataagaatcttgttacaggtttcactgagggtgctgtc 600
Query: 1014 ggtgaagacatgtaccttgaggctttagagaaatgccgtgcagccagtgacctggtcttc 1073
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 ggtgaagacatgtaccttgaggctttagagaaatgccgtgcagccagtgacctggtcttc 660
Query: 1074 gacttctatagggatgtagtgaggaaatacagtgatgttatataacgggaatgttatatt 1133
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 gacttctatagggatgtagtgaggaaatacagtgatgttatataacgggaatgttatatt 720
Query: 1134 gacaatgatagttattaaacgtttttctatggacaattagatttttaaataatataaatg 1193
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 gacaatgatagttattaaacgtttttctatggacaattagatttttaaataatataaatg 780
Query: 1194 catgtgaagtgatttataaatacatttaataattgtttatat 1235
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 catgtgaagtgatttataaatacatttaataattgtttatat 822
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 219,377
Number of extensions: 5016
Number of successful extensions: 5016
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 5016
Number of HSP's successfully gapped: 1
Length of query: 1618
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1601
Effective length of database: 8,119,229
Effective search space: 12998885629
Effective search space used: 12998885629
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)