BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN20439 (UTR included)
(2198 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01019A1H08 84 1e-15
BF01049B1F01 78 7e-14
BF01014B2F02 74 1e-12
BF14_335_C2 74 1e-12
BF14_335_C5 72 4e-12
>BF01019A1H08
Length = 504
Score = 83.8 bits (42), Expect = 1e-15
Identities = 81/93 (87%), Gaps = 2/93 (2%)
Strand = Plus / Plus
Query: 1622 atggattcaccgggctggcgccgggtccatgg--ttgcagggagaggagcttcgacagag 1679
|||||||||||| || || ||||||||||| | ||||||||||||||||||| |||| |
Sbjct: 387 atggattcaccgtgcgggtgccgggtccatcgcgttgcagggagaggagcttcaacagtg 446
Query: 1680 cctgggacttgcgacctaggtgtaactttaagg 1712
||||||| |||||||| ||||||| |||||||
Sbjct: 447 cctgggagttgcgacccaggtgtaggtttaagg 479
>BF01049B1F01
Length = 840
Score = 77.8 bits (39), Expect = 7e-14
Identities = 48/51 (94%)
Strand = Plus / Plus
Query: 1653 gttgcagggagaggagcttcgacagagcctgggacttgcgacctaggtgta 1703
|||||||||||||||||||| |||| ||||||||||||||||| |||||||
Sbjct: 588 gttgcagggagaggagcttcaacagtgcctgggacttgcgacccaggtgta 638
>BF01014B2F02
Length = 623
Score = 73.8 bits (37), Expect = 1e-12
Identities = 70/81 (86%)
Strand = Plus / Plus
Query: 1623 tggattcaccgggctggcgccgggtccatggttgcagggagaggagcttcgacagagcct 1682
||||| ||||| || || |||||||||| |||||||||||||||||||| ||| ||||
Sbjct: 543 tggatgcaccgtgcgggtgccgggtccagcgttgcagggagaggagcttcagcagcgcct 602
Query: 1683 gggacttgcgacctaggtgta 1703
|||||||||||| |||||||
Sbjct: 603 aggacttgcgacccaggtgta 623
>BF14_335_C2
Length = 1827
Score = 73.8 bits (37), Expect = 1e-12
Identities = 37/37 (100%)
Strand = Plus / Plus
Query: 1740 caccgtccaagctcctctctcctaaccaaatttgaaa 1776
|||||||||||||||||||||||||||||||||||||
Sbjct: 959 caccgtccaagctcctctctcctaaccaaatttgaaa 995
>BF14_335_C5
Length = 1597
Score = 71.9 bits (36), Expect = 4e-12
Identities = 66/76 (86%)
Strand = Plus / Minus
Query: 1618 ttccatggattcaccgggctggcgccgggtccatggttgcagggagaggagcttcgacag 1677
|||| ||||||||||| || || ||||||| ||| ||||| ||||||||||||| ||||
Sbjct: 1592 ttccgtggattcaccgtgcgggtgccgggtgcatctttgcacggagaggagcttcaacag 1533
Query: 1678 agcctgggacttgcga 1693
|||||||||||||||
Sbjct: 1532 tgcctgggacttgcga 1517
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 180,841
Number of extensions: 3110
Number of successful extensions: 3110
Number of sequences better than 1.0e-10: 5
Number of HSP's gapped: 3109
Number of HSP's successfully gapped: 5
Length of query: 2198
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2181
Effective length of database: 8,119,229
Effective search space: 17708038449
Effective search space used: 17708038449
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)