BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN20446 (UTR included)
(1765 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_335_C2 96 2e-19
BF01047B2H03 78 5e-14
BF01043B1E03 74 8e-13
>BF14_335_C2
Length = 1827
Score = 95.6 bits (48), Expect = 2e-19
Identities = 84/96 (87%)
Strand = Plus / Minus
Query: 743 aggtataacgtctaaatatctctacaacctattaaaagacatgggcctgtccagaactaa 802
||||||||| |||||| |||||||| |||| ||||| || |||||||||||||||||||
Sbjct: 1104 aggtataacagctaaatctctctacagcctactaaaatacttgggcctgtccagaactaa 1045
Query: 803 tatcaattcattcttggaacgtacttcgaaggcagc 838
| || ||||||||| ||||||||||||||| ||||
Sbjct: 1044 caccagttcattcttcgaacgtacttcgaagacagc 1009
>BF01047B2H03
Length = 758
Score = 77.8 bits (39), Expect = 5e-14
Identities = 72/83 (86%)
Strand = Plus / Minus
Query: 460 cttactttatccttaaagcggtttcggattggtctataacgatggatacctatgagaaac 519
|||||| |||||||||||||||||||||||| |||||| |||||||| |||| | |||
Sbjct: 134 cttactctatccttaaagcggtttcggattgcactataatcatggatacgtatggggaac 75
Query: 520 aatacaaaatcccagaggatatt 542
|||||||||||| ||| |||||
Sbjct: 74 gatacaaaatccccgagcatatt 52
>BF01043B1E03
Length = 830
Score = 73.8 bits (37), Expect = 8e-13
Identities = 67/77 (87%)
Strand = Plus / Plus
Query: 761 tctctacaacctattaaaagacatgggcctgtccagaactaatatcaattcattcttgga 820
||||||||||||| | ||| || || ||||| |||||||||| ||||| |||||||||||
Sbjct: 232 tctctacaacctactgaaacacttgagcctgcccagaactaacatcaaatcattcttgga 291
Query: 821 acgtacttcgaaggcag 837
||||||| | |||||||
Sbjct: 292 acgtactgcaaaggcag 308
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 233,667
Number of extensions: 5504
Number of successful extensions: 5504
Number of sequences better than 1.0e-10: 3
Number of HSP's gapped: 5504
Number of HSP's successfully gapped: 3
Length of query: 1765
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1748
Effective length of database: 8,119,229
Effective search space: 14192412292
Effective search space used: 14192412292
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)