BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN20457 (UTR included)
(1558 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_2597_C1 1552 0.0
>BF14_2597_C1
Length = 815
Score = 1552 bits (783), Expect = 0.0
Identities = 807/815 (99%)
Strand = Plus / Plus
Query: 435 ggacagcgatctgggcacaacaacattgaaaaacctggacatataagaaacaaaacacac 494
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggacagcgatctgggcacaacaacattgaaaaacctggacatataagaaacaaaacacac 60
Query: 495 ggaacaatgtccacagtctcggactgcttcacgatcggcagcatcgtcgccacgcggacg 554
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ggaacaatgtccacagtctcggactgcttcacgatcggcagcatcgtcgccacgcggacg 120
Query: 555 tgctacaacgaggacatcgagggcgaggtgctggccttcgatccacagaccaagatgttg 614
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tgctacaacgaggacatcgagggcgaggtgctggccttcgatccacagaccaagatgttg 180
Query: 615 atcctaaaatgcccatcatccagcggtaatcccaaacgccacgacgtccacatcgtgaac 674
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 atcctaaaatgcccatcatccagcggtaatcccaaacgccacgacgtccacatcgtgaac 240
Query: 675 ctgtccctggtcagcgacgttcagatcaagaaggaggttacaactgtcccggagccgcca 734
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ctgtccctggtcagcgacgttcagatcaagaaggaggttacaactgtcccggagccgcca 300
Query: 735 cagtcgttgaatcttcacaggctcaacaccagagttaggaattcaattgaaaacaaaaag 794
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 cagtcgttgaatcttcacaggctcaacaccagagttaggaattcaattgaaaacaaaaaa 360
Query: 795 cgactagtttcagctttatcagcgtgtctagaccccgagggtcaaaggctgtttctagcc 854
||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||
Sbjct: 361 cgactagtttcagctttatcagcgtgtctagacccagagggtcaaagactgtttctagcc 420
Query: 855 atcgccagggtcattgatgatgtttcatggtcggggcagagtatccgagtctacaatgaa 914
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 421 atcgccagggtcattgatgatgtttcatggtcggggcagagcatccgagtctacaatgaa 480
Query: 915 gtcacaatcacaccgccatataaggtggaaaacgtgctgggcgagcaggactccaagccg 974
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 gtcacaatcacaccgccatataaggtggaaaacgtgctgggcgagcaggactccaagccg 540
Query: 975 tataactacatccgaaagttcgtcgagcgtcactggcgcgatcaccgcgaccacaccgcc 1034
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 tataactacatccgaaagttcgtcgagcgtcactggcgcgatcaccgcgaccacaccgcc 600
Query: 1035 gccaactgttcacgacaccaataaaatattataacaccaacaacgtattattttaacaca 1094
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 gccaactgttcacgacaccaataaaatattataacaccaacaacgtattattttaacaca 660
Query: 1095 acgcagtttcgcccgttactaataaataataatgcaaacgtcacatcagtgatcagacct 1154
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 acgcagtttcgcccgttactaataaataataatgcaaacgtcacatcagtgatcagacct 720
Query: 1155 tcaaaacatttacgtatatcgaaattcattcgtaaaatttaccgattatcgacattaaat 1214
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 721 tcaaaacatttacgtatatcgaaattcattcgtaaaatctaccgattatcgacattaaat 780
Query: 1215 aacgcagatccgatttgtaagtcataaagtattaa 1249
|||||||||| ||||||||| | ||||||||||||
Sbjct: 781 aacgcagatctgatttgtaacttataaagtattaa 815
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 212,466
Number of extensions: 4319
Number of successful extensions: 4319
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 4319
Number of HSP's successfully gapped: 1
Length of query: 1558
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1541
Effective length of database: 8,119,229
Effective search space: 12511731889
Effective search space used: 12511731889
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)