BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN20481 (UTR included)
(1239 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01021B2D05 640 0.0
>BF01021B2D05
Length = 766
Score = 640 bits (323), Expect = 0.0
Identities = 338/343 (98%)
Strand = Plus / Plus
Query: 494 cagtatcatgaaaagtctacgggaaagtgaaagagagataactattagcgctccatgggg 553
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 211 cagtatcatgaaaagtctacgggaaagtgaaagagagataactattagcgctccttgggg 270
Query: 554 caagatcgctggtatcacatggggtaacccggataatccaccggtactgctgtgccccgg 613
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 271 caagatcgctggtatcacatggggtaacccggataatccaccggtactgctgtgccccgg 330
Query: 614 acgcatcgacccctgttgtctgttccgctatttggtgatgagattgcccagcaacttttt 673
||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 331 acgcatcgatccctgttgtctgttccgctatttggtgatgagattgcccagcaactcttt 390
Query: 674 ttatgttgctgtagatttgccgggcaatggtctctcggatcatttgccggtgggcatcag 733
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 391 ttatgttgctgtagatttgccgggcaacggtctctcggatcatttgccggtgggcatcag 450
Query: 734 gttctctgtgtgggacttggtgccgactgtatccagagtcgctgatcattatcaatggaa 793
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 451 gttctctgtgtgggacttggtgccgactgtatccagagtcgctgatcattaccaatggaa 510
Query: 794 aaaatttatttacataggacattccctaggaacagccgtaggt 836
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 511 aaaatttatttacataggacattccctaggaacagccgtaggt 553
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 194,562
Number of extensions: 4936
Number of successful extensions: 4936
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 4936
Number of HSP's successfully gapped: 1
Length of query: 1239
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1222
Effective length of database: 8,119,229
Effective search space: 9921697838
Effective search space used: 9921697838
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)