BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN20493 (UTR included)
(1557 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01032A2F07 1314 0.0
BF14_3313_C1 545 e-155
BF01056B2C04 123 9e-28
>BF01032A2F07
Length = 768
Score = 1314 bits (663), Expect = 0.0
Identities = 693/700 (99%), Gaps = 6/700 (0%)
Strand = Plus / Plus
Query: 825 gtttcaaaccaataaactacgcggcggcggcgaaagccaacaaacctaagaaaccagagc 884
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 71 gtttcaaaccaataaactacgcggcggcggcgaaagccaacaaacctaagaaaccagagc 130
Query: 885 aggacaaacccaaatccgacaaaccagcagagaaaccgaaatctgagaaaccagcggaga 944
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 131 aggacaaacccaaatccgacaaaccagcagagaaaccgaaatctgagaaaccagcggaga 190
Query: 945 aaccgaaatctgagaaaccagtgaaaccagccgataaggataagaaaccgctgaaagaga 1004
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 191 aaccgaaatctgagaaaccagtgaaaccagccgataaggataagaaaccgctgaaagaga 250
Query: 1005 aaccaaaggtgaaaacagacaaaccggttcaaaggaagaactctgctaaataaataatat 1064
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 251 aaccaaaggtgaaaacagacaaaccggttcaaaggaagaactctgctaaataattaatat 310
Query: 1065 atatatata--atacatttatatagtaaatactaaataatttgaagggttatcaacatta 1122
||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 atatatatataatacatttatatagtaaatactaaataatttgaagggttatcaacatta 370
Query: 1123 tgcctttatagcggtctcatatatataagacaggcgtacatatgtattatatatatatat 1182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 tgcctttatagcggtctcatatatataagacaggcgtacatatgtattatatatatatat 430
Query: 1183 atat--gtgaagataactaacacttatgaaatactatggatatatctgtgtgtccgtatg 1240
|||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 431 atatatgtgaagataactaacac--atgaaatactatggatatatctgtgtgtccgtatg 488
Query: 1241 tttgagatcgctggaaatcatgtttaattgtgatagatagtatgcattctattgaagaaa 1300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 489 tttgagatcgctggaaatcatgtttaattgtgatagatagtatgcattctattgaagaaa 548
Query: 1301 aaaaaattaaaaaaaaaagatgtaaaaaaacctataaataaaataattataacatagtta 1360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 549 aaaaaattaaaaaaaaaagatgtaaaaaaacctataaataaaataattataacatagtta 608
Query: 1361 ttatagagctagatatactggatgtaatgttatacaaaagattagagggtagttggcata 1420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 609 ttatagagctagatatactggatgtaatgttatacaaaagattagagggtagttggcata 668
Query: 1421 ggaatgtttatctggcttgtgattggtcgattttgtgtatgacgtgacaatggaccaatc 1480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 669 ggaatgtttatctggcttgtgattggtcgattttgtgtatgacgtgacaatggaccaatc 728
Query: 1481 acggcgcggcgctagtttaatgaaaaaccagatgtgatct 1520
||||||||||||||||||||||||||||||||||||||||
Sbjct: 729 acggcgcggcgctagtttaatgaaaaaccagatgtgatct 768
>BF14_3313_C1
Length = 755
Score = 545 bits (275), Expect = e-155
Identities = 275/275 (100%)
Strand = Plus / Plus
Query: 365 ggtggttacgtgatgacgggcgcgtactacccgccgtacgcggcgccgcctccagtacct 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 ggtggttacgtgatgacgggcgcgtactacccgccgtacgcggcgccgcctccagtacct 540
Query: 425 gacaattttgaagactatatgtggatggagaatgaggaggaattcgataaacaggttatg 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gacaattttgaagactatatgtggatggagaatgaggaggaattcgataaacaggttatg 600
Query: 485 cagcagttggaagaagaggcacttatggagcaatgtatagaagctatgttagaagacgaa 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 cagcagttggaagaagaggcacttatggagcaatgtatagaagctatgttagaagacgaa 660
Query: 545 cagagagaacggcatagaactgtctccaacggacactgtgcaacaacaagtagtggttcg 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 cagagagaacggcatagaactgtctccaacggacactgtgcaacaacaagtagtggttcg 720
Query: 605 tgtaacctgtccctggaggagacgatctccaggtc 639
|||||||||||||||||||||||||||||||||||
Sbjct: 721 tgtaacctgtccctggaggagacgatctccaggtc 755
>BF01056B2C04
Length = 713
Score = 123 bits (62), Expect = 9e-28
Identities = 65/66 (98%)
Strand = Plus / Plus
Query: 1492 ctagtttaatgaaaaaccagatgtgatctcgcctacgatcggttgcttcatcttgctatg 1551
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 1 ctagtttaatgaaaaaccagatgtgatctcgcctacgatcggttgcttcatctcgctatg 60
Query: 1552 aaggac 1557
||||||
Sbjct: 61 aaggac 66
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 294,878
Number of extensions: 17979
Number of successful extensions: 17979
Number of sequences better than 1.0e-10: 3
Number of HSP's gapped: 17960
Number of HSP's successfully gapped: 3
Length of query: 1557
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1540
Effective length of database: 8,119,229
Effective search space: 12503612660
Effective search space used: 12503612660
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)