BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN20499 (UTR included)
(2083 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01027A1G12 712 0.0
>BF01027A1G12
Length = 704
Score = 712 bits (359), Expect = 0.0
Identities = 368/371 (99%)
Strand = Plus / Plus
Query: 1713 aacaggttgcttttgtttcattttagaagtattatacataatatgtagggtagactttaa 1772
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aacaggttgcttttgtttcattttagaagtattatacataatatgtagggtagactttaa 60
Query: 1773 caaacactcaagtgtcatttaattacagtgtacaaacattaacagaattgttaatagtga 1832
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 caaacactcaagtgtcatttaattacagtgtacaaacattaacagaattgttaatagtga 120
Query: 1833 atttgatatatgtatataagttttattatgtaataaatcttccattgtgtaaataattca 1892
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 121 atttgatatatgtatataagttttattttgtaataaatcttccattgtgtaaataattca 180
Query: 1893 taatgttaaattattgtctctagggccttagtttaaatatattgttgactcgaatacata 1952
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 181 taatgttaaattattgtctctagggccttagtttaaaaatattgttgactcgaatacata 240
Query: 1953 gttgttaataaaaaaatatcataataaagaaaacaatgagagaacttttatacttacttt 2012
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 241 gttgttaataaaaaaatatcataataaagaaaacaatgagagaactcttatacttacttt 300
Query: 2013 attaatattaaaaattcttaaaataacattaatgtactattggtcccaatggttcagctt 2072
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 attaatattaaaaattcttaaaataacattaatgtactattggtcccaatggttcagctt 360
Query: 2073 tgatgttcccg 2083
|||||||||||
Sbjct: 361 tgatgttcccg 371
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 336,721
Number of extensions: 8329
Number of successful extensions: 8329
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 8329
Number of HSP's successfully gapped: 1
Length of query: 2083
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2066
Effective length of database: 8,119,229
Effective search space: 16774327114
Effective search space used: 16774327114
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)