BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN20501 (UTR included)
(1291 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01027A1G12 1320 0.0
>BF01027A1G12
Length = 704
Score = 1320 bits (666), Expect = 0.0
Identities = 678/682 (99%)
Strand = Plus / Minus
Query: 438 taaaacataaccaaatactttttactttattgttgtaaattagagtagtttttaaacaca 497
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 682 taaaacataaccaaatactttttactttattgttgtaaattagagtagttttaaaacaca 623
Query: 498 gctatggcttcaggtctagaaaattatattaatcagacagtgtctgtgataactgcagat 557
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 622 gctatggcttcaggtctagaaaattatattaatcagacagtgtctgtgataactgcagat 563
Query: 558 ggaagaaattttataggcacattaaaaggattcgaccaaactataaacattatattggat 617
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 562 ggaagaaattttataggcacattaaaaggattcgaccaaactataaacattatattggat 503
Query: 618 gaatcccatgaaagagtgttttcgtcgtctacaggagtagcacaagttgttctcgggctt 677
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 gaatcccatgaaagagtgttttcgtcgtctacaggagtagcacaagttgttctcgggctt 443
Query: 678 cacattatacgtggtgacaatatagcgatcgtcggacaaatagacgagtctatagatagt 737
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 cacattatacgtggtgacaatatagcgatcgtcggacaaatagacgagtctatagatagt 383
Query: 738 agattagatctcgggaacatcaaagctgaaccattgggaccaatagtacattaatgttat 797
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 agattagatctcgggaacatcaaagctgaaccattgggaccaatagtacattaatgttat 323
Query: 798 tttaagaatttttaatattaataaagtaagtataaaagttctctcattgttttctttatt 857
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 322 tttaagaatttttaatattaataaagtaagtataagagttctctcattgttttctttatt 263
Query: 858 atgatatttttttattaacaactatgtattcgagtcaacaatatatttaaactaaggccc 917
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 262 atgatatttttttattaacaactatgtattcgagtcaacaatatttttaaactaaggccc 203
Query: 918 tagagacaataatttaacattatgaattatttacacaatggaagatttattacataataa 977
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 202 tagagacaataatttaacattatgaattatttacacaatggaagatttattacaaaataa 143
Query: 978 aacttatatacatatatcaaattcactattaacaattctgttaatgtttgtacactgtaa 1037
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 142 aacttatatacatatatcaaattcactattaacaattctgttaatgtttgtacactgtaa 83
Query: 1038 ttaaatgacacttgagtgtttgttaaagtctaccctacatattatgtataatacttctaa 1097
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 82 ttaaatgacacttgagtgtttgttaaagtctaccctacatattatgtataatacttctaa 23
Query: 1098 aatgaaacaaaagcaacctgtt 1119
||||||||||||||||||||||
Sbjct: 22 aatgaaacaaaagcaacctgtt 1
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 255,091
Number of extensions: 6441
Number of successful extensions: 6441
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 6441
Number of HSP's successfully gapped: 1
Length of query: 1291
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1274
Effective length of database: 8,119,229
Effective search space: 10343897746
Effective search space used: 10343897746
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)