BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN20514 (UTR included)
(2515 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01026B2G10 795 0.0
>BF01026B2G10
Length = 496
Score = 795 bits (401), Expect = 0.0
Identities = 447/464 (96%), Gaps = 15/464 (3%)
Strand = Plus / Plus
Query: 1889 gtgtccgtctgtgtcgtgtgtgtccaccaccatgctgctgacggtagtggcgtcgcagct 1948
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11 gtgtccgtctgtgtcgtgtgtgtccaccaccatgctgctgacggtagtggcgtcgcagct 70
Query: 1949 ggccgtcatgttcctgtattcgttgtacaaagaaaggaaagaggcgcaggctaagaaatt 2008
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 71 ggccgtcatgttcctgtattcgttgtacaaagaaaggaaagaggcgcaggctaagaaatt 130
Query: 2009 cttctgatgagtgtatgtccgtctccgcgctgccttcacctcacttggagattattagat 2068
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 131 cttctgatgagtgtatgtccgtctccgcgctgccttcacctcactgggagattattagat 190
Query: 2069 ttatattgaacgttgtatttttatattattattatttggaggatgattagtttgaaattc 2128
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 191 ttatattgaacgttgtatttttatattattattatttggaggatgattagtttgaaattc 250
Query: 2129 tatattttggtat-------cgtctcccgtctcccgtccccgtcccccgaccccggcccc 2181
||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 tatattttggtatcgtctcccgtctcccgtctcccgtccccgtcccccgaccccggcccc 310
Query: 2182 cgtctgtcggatgtcacaaaacgcaatttagttgtatactagtacccgggcagg------ 2235
||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 311 cgtctgtcggatgtcacaaaacgcaatttagttatatactagtacccgggcaggccggag 370
Query: 2236 --ccggagtcccggagcagcgcggcgccggtcgcggccctgagtggatgtcttgtacata 2293
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 tcccggagtcccggagcagcgcggcgccggtcgcggccctgagtggatgtcttgtacata 430
Query: 2294 attaatatttatattttttctcttttagtaaatattatttgtca 2337
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 431 attaatatttatattttttctcttttagtaaatattatttgtca 474
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 322,211
Number of extensions: 9153
Number of successful extensions: 9153
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 9153
Number of HSP's successfully gapped: 3
Length of query: 2515
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2498
Effective length of database: 8,119,229
Effective search space: 20281834042
Effective search space used: 20281834042
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)