BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN20520 (UTR included)
(3589 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01051B1C02 741 0.0
BF14_729_C3 196 2e-49
>BF01051B1C02
Length = 795
Score = 741 bits (374), Expect = 0.0
Identities = 480/513 (93%), Gaps = 13/513 (2%)
Strand = Plus / Plus
Query: 3077 ggaactattctgaagttttgaagggggaggcgtctaagtgtgcagaaacgcgggcattta 3136
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 1 ggaactattctgaagttttgaagggggaggcgtctaagtgtacagaaacgcgggcattta 60
Query: 3137 ttctggatattaagaattttgtttcatgcatacattattttctttttgcagccttcagaa 3196
|||||||||||||||||||||| |||||||| |||||||||||||||||||||||
Sbjct: 61 ttctggatattaagaattttgtctcatgcatt-----ttttctttttgcagccttcagaa 115
Query: 3197 gactactttattttttgctccccaaaatgttacgtgcattgagtgctttgtttgagttat 3256
|||||||||||||||||| |||||||||||||||||| ||||| |||||||| ||
Sbjct: 116 gactactttattttttgccccccaaaatgttacgtgccttgagcgctttgtt------at 169
Query: 3257 gtttaatatagcatgtttaatgagactgttaaagacgtttctatgtcctcattaaattaa 3316
|| |||||||||||||||||||||||||||||||||||||||| || | |||||||||
Sbjct: 170 tttgaatatagcatgtttaatgagactgttaaagacgtttctatatcttggttaaattaa 229
Query: 3317 ttaattttcattataatattgagaaatttaaatgaaatattttattcgttatatatacat 3376
|| ||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 230 tttatttttgttataattttgagaaatttaaatgaaatattttattcgttatatatacat 289
Query: 3377 ataatcttttctcattcaatgctcgcgatttaaaatacacgcctcctcctcatattagtt 3436
||||||||| |||||| |||||||||| | |||||||||||||||||||||||||||||
Sbjct: 290 ataatcttt-ctcattagatgctcgcgagt-aaaatacacgcctcctcctcatattagtt 347
Query: 3437 tacatagtatataagaatattataatgttaatgacgaaatgtttttaaaccctgttgatt 3496
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 348 tacatagtatataagaatattatattgttaatgacgaaatgtttttaaaccctgttgatt 407
Query: 3497 tttccatgttaccttaatttatttaaagttttctattggtggaattccattttatattat 3556
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 408 tttccatgttaccttaatttatttaaagttttctattggtggaattccattttatattat 467
Query: 3557 atttatgttatttttattattatttaataaaaa 3589
|||||||||||||||||||||||||||||||||
Sbjct: 468 atttatgttatttttattattatttaataaaaa 500
>BF14_729_C3
Length = 2041
Score = 196 bits (99), Expect = 2e-49
Identities = 120/127 (94%)
Strand = Plus / Plus
Query: 1842 agagaagatggctggaatctatcaaacaccagggaccttcttcttaaaaatataaaatcc 1901
|||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||
Sbjct: 1392 agagaagatggctggaatctatcaaacacctgggaccccgttcttaaaaatataaaatcc 1451
Query: 1902 catgtccgtaaccacaccgcaggacctcaagacaccgtaagcgcattctgccggcatccg 1961
|||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 1452 catgtccgaaaccacaccgcaggacctcaagacaccgtgagcgcattctgccggcatcca 1511
Query: 1962 gagcggt 1968
|||||||
Sbjct: 1512 gagcggt 1518
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 398,238
Number of extensions: 8444
Number of successful extensions: 8444
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 8443
Number of HSP's successfully gapped: 4
Length of query: 3589
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3571
Effective length of database: 8,109,745
Effective search space: 28959899395
Effective search space used: 28959899395
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)