BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN20560 (UTR included)
(2050 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01020A1B12 1588 0.0
>BF01020A1B12
Length = 833
Score = 1588 bits (801), Expect = 0.0
Identities = 816/822 (99%)
Strand = Plus / Plus
Query: 281 atactcagtcaaattattattgatattgaattgttaattgttgtttacaataaaaatgtt 340
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12 atactcagtcaaattattattgatattgaattgttaattgttgtttacaataaaaatgtt 71
Query: 341 aatgataaagtgatgaattcaaaattagttatactatgcaagtttaatgtattagtatta 400
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 72 aatgataaagtgatgaattcaaaattagttatactatgcaagtttaatgtattagtatta 131
Query: 401 gccatttcgtggacgtggacagtgtaggggctagaaacaatttttttttgtcactattta 460
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 132 gccatttcgtggacgtggacagtgtaggggctagaaacaatttttttttgtcactattta 191
Query: 461 tctatattaaacattaatattttgtttttaaaatataaaaatgaaagaatggaataaatt 520
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 192 tctatattaaatattaatattttgtttttaaaatataaaaatgaaagaatggaataaatt 251
Query: 521 atttccgaataaagaaggattcatagtattttcgttgtatataatcctttttgtatttca 580
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 atttccgaataaagaaggattcatagtattttcgttgtatataatcctttttgtatttca 311
Query: 581 aggagtttttataacagcatctaaaacagaaaatggagtttatgactataatacaacact 640
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 aggagtttttataacagcatctaaaacagaaaatggagtttatgactataatacaacact 371
Query: 641 tgttgtatttttatctgaattactaaaattgttgatatccggatttttatatacttgcaa 700
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 tgttgtatttttatctgaattactaaaattgttgatatccggatttttatatacttgcaa 431
Query: 701 acaggggaataagccaaatttattcaaagctattgctttgaattataggctgctaatata 760
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 acaggggaataagccaaatttattcaaagctattgctttgaattataggctgctaatata 491
Query: 761 ttactttataccatcacttttatactgtttctataataacctggcatttataaacttgtc 820
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 492 ttactttataccatcacttttatactgtttctataataacctggcatttataaacttgtc 551
Query: 821 ccattatgatcccacttcatattatattttacttcagtttcgagtagttttaacagcatt 880
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 552 ccattatgatcccacttcatattatattttacttcagtttcgagtagttttaacagcatt 611
Query: 881 aatatttcagttcctgttcaaaagaaagcttacatttttccaatggatttcgctcgggat 940
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 612 aatatttcagttcctgttcaaaaggaagcttacatttttccaatggatttcgctcgggat 671
Query: 941 acttacattaggttgtatgataaaaaactttgacactgaaacagcacagacaaaggaaga 1000
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 672 ccttacattaggttgtatgataaaaaactttgacactgaaacagcacagacaaaggaaga 731
Query: 1001 ttctgaatttttgtctcaaatttttaatatatatttcttatcaataaattttcaaaactt 1060
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 732 ttctgaatttttgtctcnnntttttaatatatatttcttatcaataaattttcaaaactt 791
Query: 1061 ttgttcatgtttggccggaacttacaatgaatatttgttgaa 1102
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 792 ttgttcatgtttggccggaacttacaatgaatatttgttgaa 833
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 404,002
Number of extensions: 10471
Number of successful extensions: 10471
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 10471
Number of HSP's successfully gapped: 1
Length of query: 2050
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2033
Effective length of database: 8,119,229
Effective search space: 16506392557
Effective search space used: 16506392557
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)