BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN20600 (UTR included)
(2488 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01019A1H08 137 1e-31
BF14_335_C4 131 6e-30
BF14_335_C2 101 5e-21
BF01056B2D01 84 1e-15
BF01014B2F02 80 2e-14
BF01048A1E04 78 8e-14
BF01017A1F03 72 5e-12
BF01049B1F01 72 5e-12
BF01044B1A07 68 7e-11
>BF01019A1H08
Length = 504
Score = 137 bits (69), Expect = 1e-31
Identities = 108/121 (89%)
Strand = Plus / Minus
Query: 180 gccccttaaagctacacctgggtggcaagtcccaggcactgttaaagctactcttccgcc 239
|||||||||| |||||||||||| |||| |||||||||||||| ||||| |||| || |
Sbjct: 482 gccccttaaacctacacctgggtcgcaactcccaggcactgttgaagctcctctccctgc 423
Query: 240 aacgcgatggacccggcacccgagcggtgaatccatggaatgctgagaggtttcgtctca 299
|||||||||||||||||||||| |||||||||||| ||||||| ||||||||| |||||
Sbjct: 422 aacgcgatggacccggcacccgcacggtgaatccattgaatgctaagaggtttcatctca 363
Query: 300 t 300
|
Sbjct: 362 t 362
>BF14_335_C4
Length = 1491
Score = 131 bits (66), Expect = 6e-30
Identities = 109/122 (89%), Gaps = 1/122 (0%)
Strand = Plus / Plus
Query: 179 ggccccttaaagctacacctgggtggcaagtcccaggcactgttaaagctactcttccgc 238
||||||||||| |||||||||||| ||||||||||||||||||| ||||| ||| |||
Sbjct: 1246 ggccccttaaacctacacctgggtcgcaagtcccaggcactgttgaagctcctc-tcctg 1304
Query: 239 caacgcgatggacccggcacccgagcggtgaatccatggaatgctgagaggtttcgtctc 298
||||||||||| ||| ||| ||| ||||||||||||||||||||||||| |||||||||
Sbjct: 1305 caacgcgatggtccccgcaaccgcacggtgaatccatggaatgctgagagttttcgtctc 1364
Query: 299 at 300
||
Sbjct: 1365 at 1366
>BF14_335_C2
Length = 1827
Score = 101 bits (51), Expect = 5e-21
Identities = 99/115 (86%)
Strand = Plus / Minus
Query: 184 cttaaagctacacctgggtggcaagtcccaggcactgttaaagctactcttccgccaacg 243
|||||| ||||||||| || |||| |||||||||||||| ||||| |||| || |||||
Sbjct: 922 cttaaacctacacctgtgtcgcaaatcccaggcactgttgaagctcctctccctgcaacg 863
Query: 244 cgatggacccggcacccgagcggtgaatccatggaatgctgagaggtttcgtctc 298
|| |||||||||||||| |||||||||||| ||| ||| ||||||||||||||
Sbjct: 862 cggcggacccggcacccgcacggtgaatccatagaaagctaagaggtttcgtctc 808
>BF01056B2D01
Length = 728
Score = 83.8 bits (42), Expect = 1e-15
Identities = 78/90 (86%)
Strand = Plus / Minus
Query: 208 gtcccaggcactgttaaagctactcttccgccaacgcgatggacccggcacccgagcggt 267
||||||||| ||||| ||||| |||| || ||| | ||||||||||||||||| ||||
Sbjct: 166 gtcccaggcgctgttgaagctcctctccctgcaatgtgatggacccggcacccgcacggt 107
Query: 268 gaatccatggaatgctgagaggtttcgtct 297
|||| ||||||||| |||||||||||||||
Sbjct: 106 gaattcatggaatgttgagaggtttcgtct 77
>BF01014B2F02
Length = 623
Score = 79.8 bits (40), Expect = 2e-14
Identities = 91/107 (85%), Gaps = 2/107 (1%)
Strand = Plus / Minus
Query: 192 tacacctgggtggcaagtcccaggcactgttaaagctactcttccgccaacgcgatggac 251
||||||||||| |||||||| |||| ||| | ||||| |||| || |||||| |||||
Sbjct: 623 tacacctgggtcgcaagtcctaggcgctgctgaagctcctctccctgcaacgc--tggac 566
Query: 252 ccggcacccgagcggtgaatccatggaatgctgagaggtttcgtctc 298
|||||||||| ||||| ||||| ||||||||||||||||||||||
Sbjct: 565 ccggcacccgcacggtgcatccactgaatgctgagaggtttcgtctc 519
>BF01048A1E04
Length = 789
Score = 77.8 bits (39), Expect = 8e-14
Identities = 54/59 (91%)
Strand = Plus / Plus
Query: 240 aacgcgatggacccggcacccgagcggtgaatccatggaatgctgagaggtttcgtctc 298
|||||||||||||||||||||| |||||||||||||||| | | ||||||||||||||
Sbjct: 1 aacgcgatggacccggcacccgcacggtgaatccatggaaagataagaggtttcgtctc 59
>BF01017A1F03
Length = 782
Score = 71.9 bits (36), Expect = 5e-12
Identities = 51/56 (91%)
Strand = Plus / Plus
Query: 243 gcgatggacccggcacccgagcggtgaatccatggaatgctgagaggtttcgtctc 298
|||| |||||||||||||| ||||| |||||||||||||||||||| ||||||||
Sbjct: 291 gcgacggacccggcacccgcacggtgtatccatggaatgctgagaggattcgtctc 346
>BF01049B1F01
Length = 840
Score = 71.9 bits (36), Expect = 5e-12
Identities = 51/56 (91%)
Strand = Plus / Minus
Query: 178 gggccccttaaagctacacctgggtggcaagtcccaggcactgttaaagctactct 233
|||||||||| | |||||||||||| ||||||||||||||||||| ||||| ||||
Sbjct: 652 gggccccttacacctacacctgggtcgcaagtcccaggcactgttgaagctcctct 597
>BF01044B1A07
Length = 806
Score = 67.9 bits (34), Expect = 7e-11
Identities = 85/102 (83%)
Strand = Plus / Minus
Query: 193 acacctgggtggcaagtcccaggcactgttaaagctactcttccgccaacgcgatggacc 252
|||||||| | || |||||||| ||| ||| ||||| |||| || | ||||||||||||
Sbjct: 532 acacctggttcgcgagtcccagacacagttgaagctcctctccctgccacgcgatggacc 473
Query: 253 cggcacccgagcggtgaatccatggaatgctgagaggtttcg 294
|| |||||| |||||||||||| ||| ||||||| ||||||
Sbjct: 472 cgccacccgcacggtgaatccattgaacgctgagaagtttcg 431
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 317,302
Number of extensions: 6571
Number of successful extensions: 6571
Number of sequences better than 1.0e-10: 9
Number of HSP's gapped: 6569
Number of HSP's successfully gapped: 9
Length of query: 2488
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2471
Effective length of database: 8,119,229
Effective search space: 20062614859
Effective search space used: 20062614859
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)