BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN20601 (UTR included)
(5347 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01041B1G12 1487 0.0
BF14_3135_C1 1041 0.0
BF14_2592_C1 131 1e-29
>BF01041B1G12
Length = 762
Score = 1487 bits (750), Expect = 0.0
Identities = 759/762 (99%)
Strand = Plus / Plus
Query: 2846 gaggacgaggcatcacgaccccaagtaccgcctcaccatacacgagctgacgctgttcgc 2905
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gaggacgaggcatcacgaccccaagtaccgcctcaccatacacgagctgacgctgttcgc 60
Query: 2906 cgcagagatagacggactcgcctgtgtgctgcccgaagggtctgctgttaaagaagtgct 2965
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 61 cgcagagatagacggactcgcctgtgtgctgcccgaagggtctgctgtgaaagaagtgct 120
Query: 2966 tcgtcagacagctgagtttgaggacagagcgatcgcactgctggggagagacttggacga 3025
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tcgtcagacagctgagtttgaggacagagcgatcgcactgctggggagagacttggacga 180
Query: 3026 ctgtgatgctgcctccgtcagggaactagaagaggtcgttgacctgggttcccgtctctg 3085
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 181 ctgtgatgctgcctccgtcagggaactagaagaggtcgtcgacctgggttcccgtctctg 240
Query: 3086 tatagtcctgccccagctaggagcgctccaggctcgtctccagcaagagaagttcatact 3145
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tatagtcctgccccagctaggagcgctccaggctcgtctccagcaagagaagttcatact 300
Query: 3146 ctccgttcgtacacatcgcgaggacgccgcctctctcacaccagagaccattgacaaact 3205
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ctccgttcgtacacatcgcgaggacgccgcctctctcacaccagagaccattgacaaact 360
Query: 3206 gctggctgaagcagaaacggtcttaccacatagaagagttgaaacggaacgggctgggct 3265
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gctggctgaagcagaaacggtcttaccacatagaagagttgaaacggaacgggctgggct 420
Query: 3266 gtataaattgaaattacaagttgaagaatgggaacagaaagcccgggctatattagacgt 3325
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gtataaattaaaattacaagttgaagaatgggaacagaaagcccgggctatattagacgt 480
Query: 3326 gaaccgggaacgcgatgatgattcacacactacgctggctgatttggaagaattgttagc 3385
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 gaaccgggaacgcgatgatgattcacacactacgctggctgatttggaagaattgttagc 540
Query: 3386 agctgctgatgaagtggaagcagcgctgccctctagacactcgttggctacagccgctgc 3445
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 agctgctgatgaagtggaagcagcgctgccctctagacactcgttggctacagccgctgc 600
Query: 3446 acacgccaaagactggcttgccaaggtggaggaaatgcaatcaaaggaattatatccata 3505
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 acacgccaaagactggcttgccaaggtggaggaaatgcaatcaaaggaattatatccata 660
Query: 3506 catgcacagtgttgaagctctgtgcaaacgcggagcacagatacctgtggctctgctcga 3565
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 catgcacagtgttgaagctctgtgcaaacgcggagcacagatacctgtggctctgctcga 720
Query: 3566 gaaaagacatttggcggcagccctactatcagccagggactg 3607
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 gaaaagacatttggcggcagccctactatcagccagggactg 762
>BF14_3135_C1
Length = 1059
Score = 1041 bits (525), Expect = 0.0
Identities = 537/541 (99%)
Strand = Plus / Plus
Query: 4170 tggcaggacgccgctcgagcactactggcttctcttccggctacacgcgtggagaggggg 4229
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 214 tggcaggacgccgctcgagcactactggcttctctgccggctacacgcgtggagagggga 273
Query: 4230 gagcgccaggggaggggagacgcacacaggtcgtcagcgagtgtggaacacgcatacagt 4289
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 274 gagcgccaggggaggggagacgcacacaggtcgtcagcgagtgtggaacacgcatacagt 333
Query: 4290 gcgacacctcgcaccagcacagctcgagtttcgccggtcatgctacagagactcgaagat 4349
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 gcgacacctcgcaccagcacagctcgagtttcgccggtcatgctacagagactcgaagat 393
Query: 4350 ctcatgatggaaggtgacctgttagaggttcgtttggaggaacagcgtctcgtatgggct 4409
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 394 ctcatgatggaaggtgacctgttagaggttcgtttggaggaacagcgtctcgtatgggct 453
Query: 4410 gcggtgtgtgcggctcgtgcggcggaaggtcggcgggcggcgcgagtgttggacgccgga 4469
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 454 gcggtgtgtgcggctcgtgcggcggaaggtcggcgggcggcgcgagtgttggacgccgga 513
Query: 4470 aggaggaagagagcccagagaccagctcgacaccatcacccgctcaagaggacacgcgtc 4529
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 514 aggaggaagagagcccagagaccagctcgacaccatcacccgctcaagaggacacgcgtc 573
Query: 4530 ttacacggaacaaacaccacaaagaccaccatgaagcgcggctcggccacaaccaccaac 4589
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 574 ttacacggaacaaacaccacaaagaccaccatgaagcgcggctcggccacaaccaccaac 633
Query: 4590 tacttaaatcggaagcagggcatgtcgtctggttctggtctgatgatgcggaagcactac 4649
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 634 tacttaaatcggaagcagggcatgtcgtctggttctggtctgatgatgcggaaacactac 693
Query: 4650 ctggcccgccaggagcgtcgtaagcgcccgctcccccagcgcccgcctccacggccccgc 4709
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 694 ctggcccgccaggagcgtcgtaagcgcccgctcccccagcgcccgcctccccggccccgc 753
Query: 4710 g 4710
|
Sbjct: 754 g 754
Score = 339 bits (171), Expect = 3e-92
Identities = 171/171 (100%)
Strand = Plus / Plus
Query: 4710 ggcaaggaggtggactgggttcaatgcgacggcggctgcgatcagtggttccacatgcac 4769
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 889 ggcaaggaggtggactgggttcaatgcgacggcggctgcgatcagtggttccacatgcac 948
Query: 4770 tgcgtgggcctgagtcgcggcgcgctgcgagaggacgacgactacgtctgcggctcgtgt 4829
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 949 tgcgtgggcctgagtcgcggcgcgctgcgagaggacgacgactacgtctgcggctcgtgt 1008
Query: 4830 gccgagacacggaagtaactggctggcggcgggcggtcggttaaaacgaac 4880
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1009 gccgagacacggaagtaactggctggcggcgggcggtcggttaaaacgaac 1059
>BF14_2592_C1
Length = 697
Score = 131 bits (66), Expect = 1e-29
Identities = 66/66 (100%)
Strand = Plus / Plus
Query: 5282 ttttttttttttaattaatatatttgctatgtattttactttcatatatatatgtatatg 5341
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 26 ttttttttttttaattaatatatttgctatgtattttactttcatatatatatgtatatg 85
Query: 5342 tatatt 5347
||||||
Sbjct: 86 tatatt 91
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 479,235
Number of extensions: 21372
Number of successful extensions: 21372
Number of sequences better than 1.0e-10: 3
Number of HSP's gapped: 21370
Number of HSP's successfully gapped: 4
Length of query: 5347
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 5329
Effective length of database: 8,109,745
Effective search space: 43216831105
Effective search space used: 43216831105
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)