BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN20613 (UTR included)
(1708 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01055B2E04 1168 0.0
BF01059B2D04 821 0.0
>BF01055B2E04
Length = 747
Score = 1168 bits (589), Expect = 0.0
Identities = 616/625 (98%)
Strand = Plus / Plus
Query: 430 aaccaaaccaaaataaaataattaataaatttgttttaaaaaatctaacagggaatgtaa 489
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 1 aaccaaaccaaaataaaataattaataaatttgttttaaaaaacctaacagggaatgtaa 60
Query: 490 aaattatcaaaatgacggagaattctgaagagatcagaacagtaaaaggcaaacggaaga 549
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 61 aaattaccaaaatgacggagaattctgaagagatcagaacagtaaaaggcaaacggcaga 120
Query: 550 taaattttcgtaaaattactacattcgtttttatatctggtttggctctcgttttcggct 609
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 taaattttcgtaaaattactacattcgtttttatatctggtttggctctcgttttcggct 180
Query: 610 acacgcactataggtacgtgtcaacattattcgaaaatgaccgcaacttctcgcatctgt 669
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 acacgcactataggtacgtgtcaacattattcgaaaatgaccgcaacttctcgcatctgt 240
Query: 670 cggagttggaacgggaaatgtcgttcaggacggagatgggtttctactattcttattata 729
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 cggagttggaacgggaaatgtcgttcaggacggagatgggtttctactattcttattata 300
Query: 730 aaaccgtgatcgaggagaagcaattcctagccggcatagctcggttgatgtacgataagc 789
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 301 aaaccgtgatcgaggagaagcaattcctggccggcatagctcggttgatgtacgataagc 360
Query: 790 tgatagaataccccaaagacgtcaatgctttgaacagatttaatattgcaccggaggtga 849
|||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||
Sbjct: 361 tgatagaataccccaaagacgtgaatgctttgaacagattcaatattgcaccggaggtga 420
Query: 850 tgatagcggctatgtacagatatttggagccctggttgaacacttcttcatataaagagt 909
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 421 tgatagcggctatgtacagatatttggagccctggttgaacacgtcttcatataaagagt 480
Query: 910 gtcacatggttgagcggggtggtgaccacagtccggtggagagctgtataggtatagggg 969
||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 481 gtcacgtggttgagcggggtggtgaccacagcccggtggagagctgtataggtatagggg 540
Query: 970 aaccggtgtacttctacctagaggtgatctgggtgatggccgggttcacagtcgcagtac 1029
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 aaccggtgtacttctacctagaggtgatctgggtgatggccgggttcacagtcgcagtac 600
Query: 1030 tcttcttacaggctacggttctcag 1054
|||||||||||||||||||||||||
Sbjct: 601 tcttcttacaggctacggttctcag 625
>BF01059B2D04
Length = 660
Score = 821 bits (414), Expect = 0.0
Identities = 431/437 (98%)
Strand = Plus / Plus
Query: 411 ggccatatttaaaacaatcaaccaaaccaaaataaaataattaataaatttgttttaaaa 470
|||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||
Sbjct: 1 ggccatatttaaaacaatcaaccaaacctaaatancataattaataaatttgttttaaaa 60
Query: 471 aatctaacagggaatgtaaaaattatcaaaatgacggagaattctgaagagatcagaaca 530
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aatctaacagggaatgtaaaaattatcaaaatgacggagaattctgaagagatcagaaca 120
Query: 531 gtaaaaggcaaacggaagataaattttcgtaaaattactacattcgtttttatatctggt 590
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gtaaaaggcaaacggaagacaaattttcgtaaaattactacattcgtttttatatctggt 180
Query: 591 ttggctctcgttttcggctacacgcactataggtacgtgtcaacattattcgaaaatgac 650
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ttggctgtcgttttcggctacacgcactataggtacgtgtcaacattattcgaaaatgac 240
Query: 651 cgcaacttctcgcatctgtcggagttggaacgggaaatgtcgttcaggacggagatgggt 710
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 cgcaacttctcgcatctgtcggagttggaacgggaaatgtcgttcaggacggagatgggt 300
Query: 711 ttctactattcttattataaaaccgtgatcgaggagaagcaattcctagccggcatagct 770
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ttctactattcttattataaaaccgtgatcgaggagaagcaattcctagccggcatagct 360
Query: 771 cggttgatgtacgataagctgatagaataccccaaagacgtcaatgctttgaacagattt 830
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 361 cggttgatgtacgataagctgatagaataccccaaagacgtgaatgctttgaacagattt 420
Query: 831 aatattgcaccggaggt 847
|||||||||||||||||
Sbjct: 421 aatattgcaccggaggt 437
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 300,144
Number of extensions: 28397
Number of successful extensions: 28397
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 28397
Number of HSP's successfully gapped: 2
Length of query: 1708
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1691
Effective length of database: 8,119,229
Effective search space: 13729616239
Effective search space used: 13729616239
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)