BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN20618 (UTR included)
(1492 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01032B2C07 1195 0.0
>BF01032B2C07
Length = 623
Score = 1195 bits (603), Expect = 0.0
Identities = 610/613 (99%)
Strand = Plus / Plus
Query: 344 aattgatgttatccatgtaagcaaacttagggatttcgttgggctattaacacacaagga 403
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 11 aattgatgttatccatgtaagcaaacttagggatttcgttgggctattaacacacaanna 70
Query: 404 tatggatttgtcgtgtgtttaacttttttctataatgaacagtgatcaaagtcctggaag 463
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 71 tatggatttgtcgtgtgtttaacttttttctataatgaacagtgatcaaagtcctggaag 130
Query: 464 tccactagacataagtgatcgtgaacaggcagttttaatggatcccatagatcatgcccg 523
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 131 tccactagacataagtgatcgtgaacaggcagttttaatggatcccatagatcatgcccg 190
Query: 524 cgccagatatccttactgtattgtttggactcctattcctgtactaacgtggatattccc 583
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 191 cgccagatatccttactgtattgtttggactcctattcctgtactaacgtggatattccc 250
Query: 584 gttccttggtcatatgggtatttgcatgtcaaatggcgttattcgtgatttcgccggccc 643
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 gttccttggtcatatgggtatttgcatgtcaaatggcgttattcgtgatttcgccggccc 310
Query: 644 atattttgtatcagaagatctcatggcttttggaaatcccactaagtactggcagttgtc 703
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 atattttgtatcagaagatctcatggcttttggaaatcccactaagtactggcagttgtc 370
Query: 704 gccacagcgggctactaatggtcaggcggggtgggatgcggcagtagcagaagcttcaga 763
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 gccacagcgggctactaatggtcaggcggggtgggatgcggcagtagcagaagcttcaga 430
Query: 764 aatatataaaaaaagaatgcatataatattctatgataactgccactcccatgtggctgc 823
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 431 aatatataaaaaaagaatgcatataatattctatgataactgccactcccatgtggctgc 490
Query: 824 agcgctcaacatcatgaactacggcggctgtaagaactggaacatggtgaagctggcttt 883
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 491 agcactcaacatcatgaactacggcggctgtaagaactggaacatggtgaagctggcttt 550
Query: 884 ctacatgataccatattccaaatatgtcagtttcggggcgttcttaaagacgtggctgcc 943
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 551 ctacatgataccatattccaaatatgtcagtttcggggcgttcttaaagacgtggctgcc 610
Query: 944 ttttatcatcatt 956
|||||||||||||
Sbjct: 611 ttttatcatcatt 623
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 214,430
Number of extensions: 5161
Number of successful extensions: 5161
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 5161
Number of HSP's successfully gapped: 1
Length of query: 1492
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1475
Effective length of database: 8,119,229
Effective search space: 11975862775
Effective search space used: 11975862775
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)