BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN20623 (UTR included)
(4660 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01017A1F12 1511 0.0
BF01013A1E12 1455 0.0
>BF01017A1F12
Length = 775
Score = 1511 bits (762), Expect = 0.0
Identities = 771/775 (99%)
Strand = Plus / Plus
Query: 1646 ttcgaggcaggcggcgcgctacctgcaggaactagactcagtgaacagggaacagaaggc 1705
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ttcgaggcaggcggcgcgctacctgcaggaactagactcagtgaacagggaacagaaggc 60
Query: 1706 cgaccaggaccgcctcgacaacgagatgaggaagaaaggggaggtggagaacaagcacag 1765
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 cgaccaggaccgcctcgacaacgagatgaggaagaaaggggaggtggagaacaagcacag 120
Query: 1766 gcagaagggccacgaaagaaacgaagcgatgaaacgtgtggagaaactaaacgaacacat 1825
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gcagaagggccacgaaagaaacgaagcgatgaaacgtgtggagaaactaaacgaacacat 180
Query: 1826 taagagctcggagcaggcgctcgaggaacagaggaggctcagagcggagctgcaggcaga 1885
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 taagagctcggagcaggcgctcgaggaacagaggaggctcagagcggagctgcaggcaga 240
Query: 1886 cgtggggtcctgtcgaggacgagcggcggccctgcagcaggcgctagaggaagtggcctc 1945
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 cgtggggtcctgtcgaggacgagcggcggccctgcagcaggcgctagaggaagtggcctc 300
Query: 1946 ccagctgggagacgctcgggtcgacaaacacgaggaggcgcgccggaggaagaagcagga 2005
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ccagctgggagacgctcgggtcgacaaacacgaggaggcgcgccggaggaagaagcagga 360
Query: 2006 gatcgtggagagcttcaagcgagagatacctggagtgtacgaccggatgataaacatgtg 2065
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gatcgtggagagcttcaagcgagagatacctggagtgtacgaccggatgataaacatgtg 420
Query: 2066 ccagccgacccacaagcgatacaacgtggccatcaccaaggtgctgggcaagtacatgga 2125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 ccagccgacccacaagcgatacaacgtggccatcaccaaggtgctgggcaagtacatgga 480
Query: 2126 ggccatcgtggtggacacggagaagacggcacgccgctgcatacaggtgctgaaggaacg 2185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 ggccatcgtggtggacacggagaagacggcacgccgctgcatacaggtgctgaaggaacg 540
Query: 2186 catgctggagcccgagaccttcctgccgctcgactacatacaagccaagccgctccggga 2245
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 catgttggagcccgagaccttcctgccgctcgactacatacaagccaagccgctccggga 600
Query: 2246 gaggctacgagacatcaaggagcccaagaacgtgaagctgttgttcgacgtgctgcgctt 2305
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 gaggctacgagacatcaaggagcccaagaacgtgaagctgttgttcgacgtgctgcgctt 660
Query: 2306 cgagccggccgccatccaccgcgccgtgctgttcgtcaccaacaacgcgctggtctgcga 2365
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 cgagccggccgccatccaccgcgccgtgctgttcgtcaccaacaacgcgctggtctgcga 720
Query: 2366 gacgcccgaggacgcgtcgcgggtcgcctacgacctcgaccgcaccaagaacagc 2420
|||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 gacgcccgnnnacgcgtcgcgggtcgcctacgacctcgaccgcaccaagaacagc 775
>BF01013A1E12
Length = 774
Score = 1455 bits (734), Expect = 0.0
Identities = 740/742 (99%)
Strand = Plus / Plus
Query: 3418 gaatccgtgtggactaccgcatgctgggtgagtccctccgcgagctggacgagccggacg 3477
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 33 gaatccgtgtggactaccgcatgctgggtgagtccctccgcgagctggacgagccggacg 92
Query: 3478 aggttaagcggcgcggggacaagctgctgaaggccatcaactccctgcagaacaccgtcg 3537
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 93 aggttaagcggcgcggggacaagctgctgaaggccatcaactccctgcagaacaccgtcg 152
Query: 3538 acaaaatacaggcgcccaacatgagggcgatgcagaaacttaatgaggtgcgagaaaaag 3597
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 153 acaaaatacaggcgcccaacatgagggcgatgcagaaacttaatgaggtgcgagaaaaag 212
Query: 3598 tgaacgctaccaatgaggctttcttagcggctaggaaacgagcgcacaaagcgaaactag 3657
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 213 tgaacgctaccaatgaggctttcttagcggctaggaaacgagcgcacaaagcgaaactag 272
Query: 3658 ccttcgaaaaggtgaagaaggagcggtacgacaagttcatgaactgcttcgaacacgtcg 3717
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 273 ccttcgaaaaggtgaagaaggagcggtacgacaagttcatgaactgcttcgaacacgtcg 332
Query: 3718 ccaatgagatcgacgccatatacaaggcgctggccatgaaccagtcggcgcaggcgttcc 3777
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 333 ccaatgagatcgacgccatatacaaggcgctggccatgaaccagtcggcgcaggcgttct 392
Query: 3778 tgggtccagagaatcccgaggagccctacctggacggagtcaactataactgcgtagcgc 3837
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 393 tgggtccagagaatcccgaggagccctacctggacggagtcaactataactgcgtagcgc 452
Query: 3838 cgggcaaacggttccagcccatgtccaacctgtcaggaggggagaagacggtggctgcgc 3897
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 453 cgggcaaacggttccagcccatgtccaacctgtcaggaggggagaagacggtggctgcgc 512
Query: 3898 tcgcgctgctcttcgccatacacagctaccagcccgccccattcttcctgctggacgaga 3957
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 513 tcgcactgctcttcgccatacacagctaccagcccgccccattcttcctgctggacgaga 572
Query: 3958 tcgacgcggccctggacaacaccaacattgggaaagtggcttccttcatccggtccaaga 4017
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 573 tcgacgcggccctggacaacaccaacattgggaaagtggcttccttcatccggtccaaga 632
Query: 4018 agggctccctgcagaccatcgtcatctcgctcaaggaggagttctacggatgcgcggacg 4077
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 633 agggctccctgcagaccatcgtcatctcgctcaaggaggagttctacggatgcgcggacg 692
Query: 4078 cactcgtcggcatctgctccgagcccgcggattgcctcgtcagtgacgtcatcaccctca 4137
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 693 cactcgtcggcatctgctccgagcccgcggattgcctcgtcagtgacgtcatcaccctca 752
Query: 4138 gcctcgagagctacaacgacta 4159
||||||||||||||||||||||
Sbjct: 753 gcctcgagagctacaacgacta 774
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 412,064
Number of extensions: 7619
Number of successful extensions: 7619
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 7619
Number of HSP's successfully gapped: 2
Length of query: 4660
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 4642
Effective length of database: 8,109,745
Effective search space: 37645436290
Effective search space used: 37645436290
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)