BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN20651 (UTR included)
(2647 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01048B1D10 1352 0.0
>BF01048B1D10
Length = 785
Score = 1352 bits (682), Expect = 0.0
Identities = 755/785 (96%), Gaps = 21/785 (2%)
Strand = Plus / Plus
Query: 844 gagcgtcgtgtgttaaattcagaccttacgtgaaaggagacgctgatgcggtagtcatac 903
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gagcgtcgtgtgttaaattcagaccttacgtgaaaggagacgctgatgcggtagtcatac 60
Query: 904 agggaagtaagcgtggttgcttctcacaagtgggttaccaagggggttatcaaattctca 963
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 agggaagtaagcgtggttgcttctcacaagtgggttaccaagggggttatcaaattctca 120
Query: 964 acttatctcgtcgccatccagccgaccgaggttgcttccgccttgggactgtagtccatg 1023
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 121 acttatctcgtcgccatccagccgaccgaggttgcttccgcctcgggactgtagtccatg 180
Query: 1024 aactactccatactcttggcttcttccacatgcagagtagtcctgaccgcgacgagttca 1083
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 aactactccatactcttggcttcttccacatgcagagtagtcctgaccgcgacgagttca 240
Query: 1084 ttgacgtattatgggataacataataagacaggctaggcacaatttccgcaagtatgact 1143
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ttgacgtattatgggataacataataagacaggctaggcacaatttccgcaagtatgact 300
Query: 1144 cactttcggtttcggattttggagttggctacgactatgacagcgttctgcattatagcc 1203
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 cactttcggtttcggattttggagttggctacgactatgacagcgttctgcattatagcc 360
Query: 1204 gtaaagctttctcttcaaatggtcaagacacgcttgtaccta------------------ 1245
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gtaaagctttctcttcaaatggtcaagacacgcttgtacctaagaatggtgctgatattg 420
Query: 1246 ---agagaatcggtctttcggaaaaggatattgttaaattgaacaaaatgtattgcgatg 1302
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gacagagaatcggtctttcggaaaaggatattgttaaattgaacaaaatgtattgcgatg 480
Query: 1303 tagatgcaggcgttatatctcaagatagtatttcatcgttcgatatggagaagaaaagga 1362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 tagatgcaggcgttatatctcaagatagtatttcatcgttcgatatggagaagaaaagga 540
Query: 1363 aaggtgctaaaaataaaccattcgtgggtcaagggctaggatatcaaaaggggaaaactg 1422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 aaggtgctaaaaataaaccattcgtgggtcaagggctaggatatcaaaaggggaaaactg 600
Query: 1423 ttattataaaactacctaaagccgatgaacagaacagtcccaaaaatcccgtacgtggtt 1482
||||||||||||||||||||||||| |||||||| ||||| |||||||||||||||||||
Sbjct: 601 ttattataaaactacctaaagccgaagaacagaatagtccaaaaaatcccgtacgtggtt 660
Query: 1483 attttagtgaaacaacgcagaccatacacccaacattgaatctagaaactggccctaaag 1542
|||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 661 atttcagtgaaacaacgcagaccatacacccaacattaaatctagaaactggccctaaag 720
Query: 1543 aagacacaattttatatgactatcagtttcctggacataatataaatgaatatatgtcac 1602
| |||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||
Sbjct: 721 angacacaattttatatgactatcagtttcctggacgtaatataaatgaatatgtgtcac 780
Query: 1603 tatta 1607
|||||
Sbjct: 781 tatta 785
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 316,899
Number of extensions: 6312
Number of successful extensions: 6312
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 6312
Number of HSP's successfully gapped: 2
Length of query: 2647
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2630
Effective length of database: 8,119,229
Effective search space: 21353572270
Effective search space used: 21353572270
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)