BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN20652 (UTR included)
(2626 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01005B1B03 1003 0.0
BF01018B2E01 523 e-148
>BF01005B1B03
Length = 794
Score = 1003 bits (506), Expect = 0.0
Identities = 531/541 (98%)
Strand = Plus / Plus
Query: 666 gaaatgaatattaaatatagacctcctcaagtaacaactgagctgcaatcgcagttacca 725
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 254 gaaatgaatattaaatatagacctcctcaagtaacaactgagctgcaatcacagttacca 313
Query: 726 aatgcaattcataatccctttggtaaacaattaagccttacgtgggaacaacaagagaca 785
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 314 aatgcaattcataatccctttggtaaacaattaagccttacatgggaacaacaagagaca 373
Query: 786 gcaatgattgatcaagaaaacaaacttcatctagcaaatcaaaggcaaagggaaaaattt 845
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 374 gcaatgattgatcaagaaaacaaacttcatctagcaaatcaaaggcaaagggaaaaattt 433
Query: 846 ttgtcaacattattacaagagcaaaaagatttagatgatgaaatatctaaaattcaagaa 905
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 434 ttgtcaacattattacaagagcaaaaagatttagatgatgaaatatctaaaattcaagaa 493
Query: 906 aatagggagttggaaagacgaaacttgatgaaaactatacaaaaagaagaaaaagagata 965
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 494 aatagggagtcggaaagacgaaacttgatgaaaactatacaaaaagaagaaaaagagata 553
Query: 966 gaatgtatagtaagaaatttcctacaatcagaaagacaaaatccagaagtaattcaacaa 1025
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 554 gaatgtatagtaagaaatttcctacaatcagaaagacaaaatccagaagtaattcaacaa 613
Query: 1026 cagttagtatacgagcagttggaacatgatcgtttgcttgaaatcgccagacaaaattat 1085
|| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 614 caactagtatacgagcagttggaacatgatcgtttgcttgaaatcgccagacaaaattat 673
Query: 1086 gacaatgtgaaaagatctgacatcatagcaaaaatgaaggagttgttagaaaaagactgt 1145
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 674 gacaatgtgaaaagatctgacatcatagcnnnnntgaaggagttgttagaaaaagactgt 733
Query: 1146 tctattaattactataaaagacactataaggataatttaaataatgttaaacagaattta 1205
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 734 tctattaattactataaaagacactataaggataatttaaataatgttaaacagaattta 793
Query: 1206 t 1206
|
Sbjct: 794 t 794
>BF01018B2E01
Length = 302
Score = 523 bits (264), Expect = e-148
Identities = 291/302 (96%)
Strand = Plus / Plus
Query: 1482 aagttggtaggtctcttagatgatcttttagatcagaaaaatttgaggaggaaacaatta 1541
|||||||||||||||||||||||||||||||||||||||||||||||||| | |||||
Sbjct: 1 aagttggtaggtctcttagatgatcttttagatcagaaaaatttgaggagnannnaatta 60
Query: 1542 ataaacaccctcaaggaagcagaaagtgaaggaaactatgcacatgacttttggcttaaa 1601
|||||||| ||||||||||| |||||||||||||||||||||| |||||||||||||||
Sbjct: 61 ataaacactctcaaggaagcnnaaagtgaaggaaactatgcacacgacttttggcttaaa 120
Query: 1602 agttatcaaaaagtgttagatgctgcacccaagtcattgttgaatgtgggaaagttggac 1661
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 agttatcaaaaagtgttagatgctgcacccaagtcattgttgaatgtgggaaagttggac 180
Query: 1662 cctctttttgcaaatcatttgctacaagaaggtgttatacattgtttgccattcttggtt 1721
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 181 cctctttttgcaaatcatttgctacaagaaggtgttatacattgtttgccattcatggtt 240
Query: 1722 aaactgttaatttcaggtatatctttacttgatataaataacgaaaatttaaaggaaaat 1781
|||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 aaactgataatttctggtatatctttacttgatataaataacgaaaatttaaaggaaaat 300
Query: 1782 gg 1783
||
Sbjct: 301 gg 302
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 390,499
Number of extensions: 9752
Number of successful extensions: 9752
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 9751
Number of HSP's successfully gapped: 2
Length of query: 2626
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2609
Effective length of database: 8,119,229
Effective search space: 21183068461
Effective search space used: 21183068461
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)