BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN20653 (UTR included)
(1369 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_729_C3 545 e-155
BF01049A2D11 182 1e-45
BF14_729_C1 131 3e-30
>BF14_729_C3
Length = 2041
Score = 545 bits (275), Expect = e-155
Identities = 452/511 (88%), Gaps = 1/511 (0%)
Strand = Plus / Plus
Query: 266 ttgaagaaggtttcgatcaagactatttacaaaccacataagaaagtgagccaattcttg 325
|||||||||||||| || || |||||||||||||||||||||||||||||||||||||||
Sbjct: 1038 ttgaagaaggtttccattaaaactatttacaaaccacataagaaagtgagccaattcttg 1097
Query: 326 agaccaatcaagagtaccatttctttgtatcaagcgggtgtttataaactcgattgtgat 385
||||||||||| |||| |||| |||| | ||||||||||| || |||||||| |||||
Sbjct: 1098 agaccaatcaaaagtaacattcctttacaacaagcgggtgtatacaaactcgactgtgac 1157
Query: 386 tgtggattatcatacattggacaaacaaaaatgagcatcgctacaagggtgaaggaacac 445
||||| || |||||||||||||| || || | |||||||| |||||| || |||||||||
Sbjct: 1158 tgtggcttgtcatacattggacagacgaagaggagcatcggtacaagagttaaggaacac 1217
Query: 446 atctcagacataaaaaaataggcgcgcatcgaaggcagcagtgtgtgaacacacaatgga 505
||||||||||| ||||| |||||||| |||||| |||||||||||||||||||||||||
Sbjct: 1218 atctcagacatcaaaaac-aggcgcgcgtcgaagtcagcagtgtgtgaacacacaatgga 1276
Query: 506 taaaccaggcccctacattcggtttgataaaccacaaatcctcgctcgtgaagacaggta 565
|||||||||| ||||||||| ||||||||||| |||||||||||||| ||||||| |||
Sbjct: 1277 caaaccaggccactacattcgttttgataaacctcaaatcctcgctcgggaagacaagta 1336
Query: 566 cataccgaggctaatccgcgaggctattgaaattaaaaaacatgcgaatttcaatagaga 625
|||||||| |||| ||||||||||||||||||||||||||| | ||||||||||||||
Sbjct: 1337 tataccgagattaattcgcgaggctattgaaattaaaaaacatcccaatttcaatagaga 1396
Query: 626 agatggctggattctatccaacacctgggatcccttccttgaaaatataaaatcccatgt 685
||||||||||| |||||| ||||||||||| ||| | ||| |||||||||||||||||||
Sbjct: 1397 agatggctggaatctatcaaacacctgggaccccgttcttaaaaatataaaatcccatgt 1456
Query: 686 ccgtgaccacaccgcaggatctcgcgacaccgtaagcgaattctgccggtgtccagagcg 745
||| |||||||||||||| ||| |||||||| |||| |||||||||| |||||||||
Sbjct: 1457 ccgaaaccacaccgcaggacctcaagacaccgtgagcgcattctgccggcatccagagcg 1516
Query: 746 gtacgccagaaaattaagaaatcaatggcgg 776
|||||||| ||||||||||| |||||||
Sbjct: 1517 gtacgccannnnattaagaaatcgatggcgg 1547
>BF01049A2D11
Length = 776
Score = 182 bits (92), Expect = 1e-45
Identities = 143/160 (89%)
Strand = Plus / Plus
Query: 395 tcatacattggacaaacaaaaatgagcatcgctacaagggtgaaggaacacatctcagac 454
|||||||||||||| ||||| | |||||||| ||||||||| || ||||||||||||||
Sbjct: 617 tcatacattggacagacaaagaggagcatcgatacaagggttaaagaacacatctcagaa 676
Query: 455 ataaaaaaataggcgcgcatcgaaggcagcagtgtgtgaacacacaatggataaaccagg 514
|| | ||||||| | |||||||| ||||||| ||||||||||||||||| ||||||||
Sbjct: 677 atcatgaaataggtgtacatcgaagtcagcagtatgtgaacacacaatggacaaaccagg 736
Query: 515 cccctacattcggtttgataaaccacaaatcctcgctcgt 554
|| |||||||||||||||||||||||||||||||||||||
Sbjct: 737 ccactacattcggtttgataaaccacaaatcctcgctcgt 776
>BF14_729_C1
Length = 981
Score = 131 bits (66), Expect = 3e-30
Identities = 103/114 (90%), Gaps = 1/114 (0%)
Strand = Plus / Minus
Query: 265 tttgaagaaggtttcgatcaagactatttacaaaccacataagaaagtgagccaattctt 324
|||||||||| |||| |||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 114 tttgaagaagctttccatcaagactattcacaaaccacataagaaagtgagccaattctt 55
Query: 325 gagaccaatcaagagtaccatttctttgtatcaagcgggtgtttataaactcga 378
|||||| |||||||||| || ||| ||| | ||||||||||| || ||||||||
Sbjct: 54 gagacctatcaagagtaaca-ttcattggaacaagcgggtgtatacaaactcga 2
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 169,443
Number of extensions: 3442
Number of successful extensions: 3442
Number of sequences better than 1.0e-10: 3
Number of HSP's gapped: 3440
Number of HSP's successfully gapped: 3
Length of query: 1369
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1352
Effective length of database: 8,119,229
Effective search space: 10977197608
Effective search space used: 10977197608
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)