BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN20658 (UTR included)
(6271 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01052B1A01 1503 0.0
>BF01052B1A01
Length = 806
Score = 1503 bits (758), Expect = 0.0
Identities = 785/794 (98%)
Strand = Plus / Plus
Query: 3381 attaaaaattcagataaaagcggtaattttgtaacgaagctttttgatgacccatttttt 3440
||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 13 attaagaattcagataaaagcggtaattttataacgaagctttttgatgacccatttttt 72
Query: 3441 gctcatttagcagaaggacttgattccaacttagttaagaaattgatagaaaattcgtta 3500
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 73 gctcatttagcagaaggacttgattccaacttagttaagaaattgatagaaaattcgtta 132
Query: 3501 atcaaacttcaagagactaaatatcaagaaggatcagaaagcaataaacaaactattgag 3560
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 133 atcaaacttcaagagactaaatatcaagaaggatcagaaagcaataaaccaactattgag 192
Query: 3561 aaacttatcgaaaattcattaatatcgttaaaagaagaagtaaaaaaagaaaataaaagg 3620
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 193 aaacttatcgaaaattcattaatatcgttaaaagaagaagtaaaaaaagaaaataaaagg 252
Query: 3621 aatgaaattatacatataccaaaaaatgaagatctggaaccatcatcaaaatcagaaatt 3680
||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 253 aatgaaattttacatataccaaaaaatgaagacctggaaccatcatcaaaatcagaaatt 312
Query: 3681 caaacatccgataatttagaagatgataaagcctgttcagctccttatgagagcatggaa 3740
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 caaacatccgatactttagaagatgataaagcctgttcagctccttatgagagcatggaa 372
Query: 3741 tatgaaagtgggacagtgggagttttttcagaccaggaaccaatgtctgattgttataac 3800
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 tatgaaagtgggacagtgggagttttttcagaccaggaaccaatgtctgattgttataac 432
Query: 3801 gcttccgcgagtgaactttctacagaagatgatacaaattctacaagatctaagttttat 3860
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 gcttccgcgagtgaactttctacagaagatgatacaaattctacaagatctaagttttat 492
Query: 3861 caaatgctagtggatgctgccatttgcgatattgaaatttcaaataacactgacgatgac 3920
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 493 caaatgctagtggatgctgccatttgcgatattgaaatttcaaataacactgacgatgac 552
Query: 3921 catctttatgaatctatacggttaaatagtagtgacccaatttatgaagaaataggtgac 3980
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 553 catctttatgaatctatacggttaaatagcagtgacccaatttatgaagaaataggtgac 612
Query: 3981 atgcctcctcctttgccaaccaatccaccgccaaattctcttttattattagatgatgaa 4040
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 613 atgcctcctcctttgccaaccaatccaccgccaaattctcttttattattagatgatgaa 672
Query: 4041 aaacgaagtgggtcccgttcaatttttgaaggtgcgtctaagtacgatattttgtcttat 4100
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 673 aaacgaagtgggtcccgttcaatttttgaaggtgcttctaagtacgatattttgtcttat 732
Query: 4101 ttagtagatgctaaagaaaggggcatagatgatgaagagacctatataactaattacaat 4160
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 733 ttagtggatgctaaagaaaggggcatagatgatgaagagacctatataactaattacaat 792
Query: 4161 aatgacaataatga 4174
||||||||||||||
Sbjct: 793 aatgacaataatga 806
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 126,680
Number of extensions: 15144
Number of successful extensions: 15144
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 15144
Number of HSP's successfully gapped: 1
Length of query: 6271
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 6253
Effective length of database: 8,109,745
Effective search space: 50710235485
Effective search space used: 50710235485
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)