BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN20662 (UTR included)
(2662 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01060A2E07 1118 0.0
>BF01060A2E07
Length = 823
Score = 1118 bits (564), Expect = 0.0
Identities = 583/588 (99%), Gaps = 1/588 (0%)
Strand = Plus / Plus
Query: 2076 aaaagacccaccttcgaattcctcaaccactacttcgagtccttcacagtgaccagtgaa 2135
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 1 aaaagacccaccttcgaattcctcaatcactacttcgagtccttcacagtgaccagtgaa 60
Query: 2136 ataccctacagagaggtccaagactagagtgctgtgataaatgtgaaattatacttaaca 2195
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ataccctacagagaggtccaagactagagtgctgtgataaatgtgaaattatacttaaca 120
Query: 2196 cttataaactgagagtgtatcgttcattttaataggaaagctgatttatttgcttttaag 2255
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 cttataaactgagagtgtatcgttcattttaataggaaagctgatttatttgcttttaag 180
Query: 2256 tgaagcctggcgacttgtaacctttaaattgtcataaactttagtactaaagtgattatg 2315
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 181 tgaagcctggcgacttgtaacctttaaattgtcataaactttagtactaaagttattatg 240
Query: 2316 atgtaaacgagcgtgtttgaggagcgtttt-tgtagggtccttagcgaataaacggtatt 2374
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 241 atgtaaacgagcgtgtttgaggagcgttttgtgtagggtccttagcgaataaacggtatt 300
Query: 2375 atatgtgtgtgtcttacatcacatcatattcgattcatgtatttggctgaccattaacaa 2434
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 301 atatgtgtgtgtcttacatcacatcacattcgattcatgtatttggctgaccattaacaa 360
Query: 2435 agcacacacagagttatagtatctttagtatttttttattcgaagcgttactaaactata 2494
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 agcacacacagagttatagtatctttagtatttttttattcgaagcgttactaaactata 420
Query: 2495 caggaaagtgtgagcttgtcgtttttattcatcggctttggtatgatttgtagttaaata 2554
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 caggaaagtgtgagcttgtcgtttttattcatcggctttggtatgatttgtagttaaata 480
Query: 2555 ttaagatgttagtaaagagaagtgaacaacaagtcggttaagtccactgacctaatataa 2614
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 ttaagatgttagtaaagagaagtgaacaacaagtcggttaagtccactgacctaatataa 540
Query: 2615 gagactatagtattgtgcaaacacctattttcttatttattagcgata 2662
|||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 541 gagactatagtattgtccaaacacctattttcttatttattagcgata 588
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 270,272
Number of extensions: 4980
Number of successful extensions: 4980
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 4979
Number of HSP's successfully gapped: 1
Length of query: 2662
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2645
Effective length of database: 8,119,229
Effective search space: 21475360705
Effective search space used: 21475360705
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)