BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN20677 (UTR included)
(2458 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_1534_C1 1608 0.0
>BF14_1534_C1
Length = 850
Score = 1608 bits (811), Expect = 0.0
Identities = 836/846 (98%)
Strand = Plus / Plus
Query: 277 tgcaaggaaaacgataatttatctattaaattacaacagttcacaattgttaaacgatct 336
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5 tgcaaggaaaacgataatttatctattaaattacaacagttcacaattgttaaacgatct 64
Query: 337 cattctccctcctatcttatcgaaagtcgtattacataaataattttatcacaagaaagt 396
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 65 cattctccctcctatcttatcgaaagtcgtattacataaataattttatcacaagaaagt 124
Query: 397 ggtgctgtgaaaaacatataatcaatactcaacagacaagtatggtgattttgcggagtg 456
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 125 ggtgctgtgaaaaacatataatcaatactcaacagacaagtatggtgattttgcggagtg 184
Query: 457 ttttgcttaataattacaaatcgtttagaatggattatagaaatatgcattatttgagaa 516
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 185 ttttgcttaataattacaaatcgtttagaatggattatagaaatatgcattatttgagaa 244
Query: 517 agagcgcgtatattaacggccaatgggtcaatgccgaaagcaaagccgtatttccagtgt 576
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 245 agagcgcgtatattaacggccaatgggtcaatgccgaaagcaaagccgtatttccagtgt 304
Query: 577 tgaacccggctgatgataaggttatcgctgagattcctgacatggatgctgcggatgcaa 636
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 tgaacccggctgatgataaggttatcgctgagattcctgacatggatgctgcggatgcaa 364
Query: 637 agagagctattgctgctgctacagaaagctttcgtacgtggaagtatacgacagctaagg 696
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 agagagctattgctgctgctacagaaagctttcgtacgtggaagtatacgacagctaagg 424
Query: 697 acagagctgcaatattaaggagatggtatgacctttgtgtaaaaaaccaggatcatcttg 756
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 425 acagagctgcaatattaaggagatggtatgacctttgtgtaaaaaaccaggatcatcttg 484
Query: 757 cagaaattataacagcggaggctggtaagcccttggctgaagccaaaggtgaaattgttt 816
|||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||
Sbjct: 485 cagaaattataacagcggaggccggtaagcccttggctgaagctaaaggtgaaattgttt 544
Query: 817 atggcagttcattcttggagttctttgctgatactgctcgacatattaacggtgaagtga 876
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 545 atggcagttcattcttggagttctttgctgatactgctcgacatattaacggtgaagtga 604
Query: 877 ttccaagtccctggccaaacaagcagatcatgttaacaagacagcctttaggggtagtgt 936
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 605 ttccaagtccctggccaaacaagcagatcatgttaacaagacagcctttaggggtagtgt 664
Query: 937 ctgttattacgccatggaacttcccatttgctatgatcactcgtaaagttggtgctttac 996
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 665 ctgttattacgccatggaacttcccatttgctatgatcactcgtaaagttggtgctttac 724
Query: 997 tggcagctggctgcacttgtgtcataaaacctgctgaagacactccgctgactgctttag 1056
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 725 tggccgctggctgcacttgtgtcataaaacctgctgaagacactccgctgactgctttag 784
Query: 1057 cagcagttcagttagcagaagaggcagggtttcccaaaggtataattaatgtagtgacag 1116
||||||||||||||||||||| || ||||||||||||||||||||||||||||| |
Sbjct: 785 cagcagttcagttagcagaagnnncannatttcccaaaggtataattaatgtagtgacgg 844
Query: 1117 caagca 1122
||||||
Sbjct: 845 caagca 850
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 330,015
Number of extensions: 7490
Number of successful extensions: 7490
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 7489
Number of HSP's successfully gapped: 1
Length of query: 2458
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2441
Effective length of database: 8,119,229
Effective search space: 19819037989
Effective search space used: 19819037989
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)