BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN20679 (UTR included)
(4870 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_701_C1 2046 0.0
>BF14_701_C1
Length = 1061
Score = 2046 bits (1032), Expect = 0.0
Identities = 1054/1060 (99%), Gaps = 1/1060 (0%)
Strand = Plus / Plus
Query: 3341 gaggtacctggaggataacttggatacattgtaccatcacctcaacaacgaaaacttctc 3400
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 gaggtacctggaggataacttggatacattgtaccatcacctcaacaacgaaaacttctc 61
Query: 3401 aagaaccctggatatcgtgtgggaacagctgggggaggttttgtacgaactgatacaagc 3460
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 aagaaccctggatatcgtgtgggaacagctgggggaggttttgtacgaactgatacaagc 121
Query: 3461 taacctcgagacagcgcgagtcgctggccgtatccgcttgatcagccgtagatatttcgg 3520
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 taacctcgagacagcgcgagtcgctggccgtatccgcttgatcagccgtagatatttcgg 181
Query: 3521 aaaaaataaagtttcaccaaagactgtgttagtccggcaccgaagggcaaagataggtcg 3580
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 aaaaaataaagtttcaccaaagactgtgttagtccggcaccgaagggcaaagataggtcg 241
Query: 3581 gtatatcgaccccaggaggctcacaaaatccgccgcagcggttatggatgcgaaacgccg 3640
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 gtatatcgaccccaggaggctcacaaaatccgccgcagcggttatggatgcgaaacgccg 301
Query: 3641 cccgccagcgttcttccacaatctccacgaatgtctcaagatcatggtgagatccttccg 3700
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 cccgccagcgttcttccacaatctccacgaatgtctcaagatcatggtgagatccttccg 361
Query: 3701 tcaggataataaagagacattcacgtctgagactctgaagagagtcgagtatttactgaa 3760
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 362 tcaggataataaagagacattcacgtctgagactctgaagagagtggagtatttactgaa 421
Query: 3761 actccacggcatggagacgagggagctgatacaccagtaccacctcgagaggtggcagga 3820
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 actccacggcatggagacgagggagctgatacaccagtaccacctcgagaggtggcagga 481
Query: 3821 acaacaatctatcactgacccgaagatgggcttgctgacaatcagggctcagttcgtaga 3880
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 acaacaatctatcactgacccgaagatgggcttgctgacaatcagggctcagttcgtaga 541
Query: 3881 agataatctgaaaatcgaaatcatgaacgctaggaatttaatgccgaccgactccaacgg 3940
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 agataatctgaaaatcgaaatcatgaacgctaggaatttaatgccgaccgactccaacgg 601
Query: 3941 tctatgcgattcatacgtccgagtgggactgcttcctgaagacacattcgctaacgttga 4000
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 602 tctatgcgattcatacgtccgagtgggactgcttcctgaagacacattcgctaacgttga 661
Query: 4001 gaaaccgaagacacaaactcacagcaagaatctgtttccattgtacgacgaaatgttcct 4060
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 662 gaaaccgaagacacaaactcacagcaagaatctgtttccattgtacgacgaaatgttcct 721
Query: 4061 cattcaactgagcccgtcccaggtgaacactaccaacggtctcatccacctggtcataaa 4120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 722 cattcaactgagcccgtcccaggtgaacactaccaacggtctcatccacctggtcataaa 781
Query: 4121 ggacaaagacatgttcagcgtcagcaacacgttcgtgggcgaggcttacttacacttcag 4180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 782 ggacaaagacatgttcagcgtcagcaacacgttcgtgggcgaggcttacttacacttcag 841
Query: 4181 tgaagtggttcatactaatgcccctatatcgagcctgccgcagcaacacctcccgctctc 4240
|||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 842 tgaagtggttcatact-atgcccctatatcgagcctgccgcaacaacacctcccgctctc 900
Query: 4241 cagaccagccaatatagacggcgacgctatcaaggccttagagtccagacaaggggataa 4300
|||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||
Sbjct: 901 cagaccagccaatatagacggcgacgctatcaaggcgttagagtctagacaaggggataa 960
Query: 4301 acaggcacgggagttcctcaagaagcaaagacagaagatgccaagcaaacagttcttctc 4360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 961 acaggcacgggagttcctcaagaagcaaagacagaagatgccaagcaaacagttcttctc 1020
Query: 4361 gttaggatgactttgaagatattttaataacgagaattgg 4400
||| ||||||||||||||||||||||||||||||||||||
Sbjct: 1021 gttgggatgactttgaagatattttaataacgagaattgg 1060
Score = 603 bits (304), Expect = e-171
Identities = 307/308 (99%)
Strand = Plus / Plus
Query: 1328 gaaacgccgcccgccagcgttcttccacaatctccacgaatgtctcaagatcatggtgag 1387
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 293 gaaacgccgcccgccagcgttcttccacaatctccacgaatgtctcaagatcatggtgag 352
Query: 1388 atccttccgtcaggataataaagagacattcacgtctgagactctgaagagagtcgagta 1447
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 353 atccttccgtcaggataataaagagacattcacgtctgagactctgaagagagtggagta 412
Query: 1448 tttactgaaactccacggcatggagacgagggagctgatacaccagtaccacctcgagag 1507
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 413 tttactgaaactccacggcatggagacgagggagctgatacaccagtaccacctcgagag 472
Query: 1508 gtggcaggaacaacaatctatcactgacccgaagatgggcttgctgacaatcagggctca 1567
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 473 gtggcaggaacaacaatctatcactgacccgaagatgggcttgctgacaatcagggctca 532
Query: 1568 gttcgtagaagataatctgaaaatcgaaatcatgaacgctaggaatttaatgccgaccga 1627
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 533 gttcgtagaagataatctgaaaatcgaaatcatgaacgctaggaatttaatgccgaccga 592
Query: 1628 ctccaacg 1635
||||||||
Sbjct: 593 ctccaacg 600
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 491,646
Number of extensions: 14926
Number of successful extensions: 14926
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 14925
Number of HSP's successfully gapped: 2
Length of query: 4870
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 4852
Effective length of database: 8,109,745
Effective search space: 39348482740
Effective search space used: 39348482740
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)