BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN20681 (UTR included)
(2296 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01012A1B09 139 2e-32
BF01012A1E04 119 2e-26
BF01052B1F12 98 8e-20
BF01056A1B08 94 1e-18
BF14_729_C3 92 5e-18
BF01025B2E05 82 4e-15
BF01044B2E12 80 2e-14
BF01011A1H06 72 4e-12
BF01019B1G10 68 7e-11
>BF01012A1B09
Length = 841
Score = 139 bits (70), Expect = 2e-32
Identities = 79/82 (96%)
Strand = Plus / Plus
Query: 2 atctaagactttcgcgagtttaattcatttaaatgaaactaatatatttcggatatacta 61
|||||||||| |||||||||| ||||||||||||||||||||||||||||||||| ||||
Sbjct: 710 atctaagactgtcgcgagttttattcatttaaatgaaactaatatatttcggatacacta 769
Query: 62 cgcggattttattattttaaaa 83
||||||||||||||||||||||
Sbjct: 770 cgcggattttattattttaaaa 791
>BF01012A1E04
Length = 841
Score = 119 bits (60), Expect = 2e-26
Identities = 70/72 (97%), Gaps = 1/72 (1%)
Strand = Plus / Minus
Query: 2 atctaagactttcgcgagtttaattcatttaaatgaaactaatata-tttcggatatact 60
||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||
Sbjct: 614 atctaagactttcgcgagttttattcatttaaatgaaactaatatattttcggatatact 555
Query: 61 acgcggatttta 72
||||||||||||
Sbjct: 554 acgcggatttta 543
>BF01052B1F12
Length = 785
Score = 97.6 bits (49), Expect = 8e-20
Identities = 67/73 (91%)
Strand = Plus / Plus
Query: 2 atctaagactttcgcgagtttaattcatttaaatgaaactaatatatttcggatatacta 61
|||||||| |||||||||||| ||||||||||||||||||||||| |||||||||||||
Sbjct: 302 atctaagaatttcgcgagttttattcatttaaatgaaactaatatttttcggatatactt 361
Query: 62 cgcggattttatt 74
|||| |||||||
Sbjct: 362 cgcgtcttttatt 374
>BF01056A1B08
Length = 761
Score = 93.7 bits (47), Expect = 1e-18
Identities = 75/83 (90%), Gaps = 1/83 (1%)
Strand = Plus / Plus
Query: 2 atctaagactttcgcgagtttaattcatttaaatgaaactaatata-tttcggatatact 60
||||||||||||||||||||| |||||||||||||||||||||||| |||||| | | ||
Sbjct: 101 atctaagactttcgcgagttttattcatttaaatgaaactaatatattttcgggtgtgct 160
Query: 61 acgcggattttattattttaaaa 83
|||| ||||||||||||||||
Sbjct: 161 gcgcgttttttattattttaaaa 183
Score = 73.8 bits (37), Expect = 1e-12
Identities = 53/57 (92%), Gaps = 1/57 (1%)
Strand = Plus / Minus
Query: 29 tttaaatgaaactaatatatt-tcggatatactacgcggattttattattttaaaaa 84
|||||||||||||||||||| ||||||| || ||||||||||||||||||||||||
Sbjct: 309 tttaaatgaaactaatatatcctcggatacaccacgcggattttattattttaaaaa 253
>BF14_729_C3
Length = 2041
Score = 91.7 bits (46), Expect = 5e-18
Identities = 82/92 (89%), Gaps = 4/92 (4%)
Strand = Plus / Minus
Query: 2 atctaagactttcgcgagtttaattcatttaaatgaaactaatatatttcggatatacta 61
|||||||| |||||||||| ||||||||||||||| ||| ||| |||||||||||||
Sbjct: 1724 atctaagattttcgcgagt---attcatttaaatgaagctagtattattcggatatacta 1668
Query: 62 cgcggattttattattttaaaaacttcataat 93
|||||||||||||| |||||||||| ||||||
Sbjct: 1667 cgcggattttatta-tttaaaaactacataat 1637
>BF01025B2E05
Length = 759
Score = 81.8 bits (41), Expect = 4e-15
Identities = 47/49 (95%)
Strand = Plus / Minus
Query: 2 atctaagactttcgcgagtttaattcatttaaatgaaactaatatattt 50
||||||||||||||||||||| ||||||||||||||||||| |||||||
Sbjct: 114 atctaagactttcgcgagttttattcatttaaatgaaactagtatattt 66
>BF01044B2E12
Length = 823
Score = 79.8 bits (40), Expect = 2e-14
Identities = 49/52 (94%)
Strand = Plus / Minus
Query: 27 catttaaatgaaactaatatatttcggatatactacgcggattttattattt 78
|||||||||||||||| ||| |||||||| ||||||||||||||||||||||
Sbjct: 85 catttaaatgaaactagtatttttcggatttactacgcggattttattattt 34
>BF01011A1H06
Length = 739
Score = 71.9 bits (36), Expect = 4e-12
Identities = 57/64 (89%)
Strand = Plus / Minus
Query: 2 atctaagactttcgcgagtttaattcatttaaatgaaactaatatatttcggatatacta 61
|||||||| |||||||| ||| ||||||||||||||| ||| ||| ||||||||| ||||
Sbjct: 601 atctaagattttcgcgacttttattcatttaaatgaatctagtatttttcggataaacta 542
Query: 62 cgcg 65
||||
Sbjct: 541 cgcg 538
>BF01019B1G10
Length = 488
Score = 67.9 bits (34), Expect = 7e-11
Identities = 55/62 (88%)
Strand = Plus / Plus
Query: 32 aaatgaaactaatatatttcggatatactacgcggattttattattttaaaaacttcata 91
|||| ||| |||||| ||||| || ||||||||| |||||||||||||||||||| ||||
Sbjct: 293 aaataaaagtaatatttttcgcatttactacgcgaattttattattttaaaaactacata 352
Query: 92 at 93
||
Sbjct: 353 at 354
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 272,047
Number of extensions: 5528
Number of successful extensions: 5528
Number of sequences better than 1.0e-10: 9
Number of HSP's gapped: 5525
Number of HSP's successfully gapped: 10
Length of query: 2296
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2279
Effective length of database: 8,119,229
Effective search space: 18503722891
Effective search space used: 18503722891
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)