BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN20699 (UTR included)
(1804 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01009B2A02 1731 0.0
>BF01009B2A02
Length = 889
Score = 1731 bits (873), Expect = 0.0
Identities = 885/889 (99%)
Strand = Plus / Plus
Query: 852 accatcactactttatggcgtcggaatccgctcggggagaacgtgtgcaacgcttgcggg 911
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 accatcactactttatggcgtcggaatccgctcggggagaacgtgtgcaacgcttgcggg 60
Query: 912 ttgtacttcaaactgcacggcatcaaccgcccgaagaacatgaagaaggattcgatccag 971
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ttgtacttcaaactgcacggcatcaaccgcccgaagaacatgaagaaggattcgatccag 120
Query: 972 acgagaaagcgaaaatctaagaacaatacgaaaacggagcgcaatataagtaaaaccacc 1031
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 acgagaaagcgaaaatctaagaacaatacgaaaacggagcgcaatataagtaaaaccacc 180
Query: 1032 gttcgctcgactctcaacgtagggacgacggagttagagaacatattggatataggcgcc 1091
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gttcgctcgactctcaacgtagggacgacggagttagagaacatattggatataggcgcc 240
Query: 1092 tcgtcgagcggtgctcgcggccgttcgctggggtactacgtgcagccgcacactgtgaaa 1151
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tcatcgagcggtgctcgcggccgttcgctggggtactacgtgcagccgcacactgtgaaa 300
Query: 1152 ctggaggagcccgcgccagcccacgcgcaccagcagcagcaacaacaccagcaacaccaa 1211
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ctggaggagcccgcgccagcccacgcgcaccagcagcagcaacaacaccagcaacaccaa 360
Query: 1212 cagcagcagcaggcctactacgacgacgagtaccgccgcgtcgagccccaggagcgcctg 1271
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 cagcagcagcaggcctactacgacgacgagtaccgccgcgtcgagccccaggagcgcctc 420
Query: 1272 gagcggccgactgtggtgtcgctcggcagctgagcgcacccgcagccgccgcagccttga 1331
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 421 gagcggccgactgtggtgtcgctcggcagctgagcgcaccctcagccgccgcagccttga 480
Query: 1332 gaatctcagtcgaataagattagttaatgtagtgtagcgagagtgagagccgaggagttg 1391
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 gaatctcagtcgaataagattagttaatgtagtgtagcgagagtgagagccgaggagttg 540
Query: 1392 ctagttgaccaaatatacgccacccgccgggaggctgttcctgacaaatttatatataaa 1451
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 ctagttgaccaaatatacgccacccgccgggaggctgttcctgacaaatttatatataaa 600
Query: 1452 gaataaatatatgagtacaagcatttatagaaaattatttaaagcaaaatatttaggacg 1511
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 601 gaataaatatatgagtacaagcatttatagaaaattatttaaagcaaaatatttagaacg 660
Query: 1512 ctccggagcctgcgttcggattgtagcagtgaagttgagtgagtgagtgaggcggtggag 1571
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 ctccggagcctgcgttcggattgtagcagtgaagttgagtgagtgagtgaggcggtggag 720
Query: 1572 tgctcgggctcgacgaaagactccccacactcgggcggggtcggtcggacggacgcactc 1631
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 tgctcgggctcgacgaaagactccccacactcgggcggggtcggtcggacggacgcactc 780
Query: 1632 ggacactccctcggctgaccatttctgttaccaaataataatatatagatcatataacac 1691
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 ggacactccctcggctgaccatttctgttaccaaataataatatatagatcatataacac 840
Query: 1692 tgtgcctcggtctacccgaagttttacattcctatgtatacatatatat 1740
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 841 tgtgcctcggtctacccgaagttttacattcctatgtatacatatatat 889
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 178,887
Number of extensions: 6991
Number of successful extensions: 6991
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 6989
Number of HSP's successfully gapped: 1
Length of query: 1804
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1787
Effective length of database: 8,119,229
Effective search space: 14509062223
Effective search space used: 14509062223
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)