BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN20712 (UTR included)
(1504 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01019A1H08 139 1e-32
BF14_335_C2 103 8e-22
BF14_335_C4 92 3e-18
BF01014B2F02 88 5e-17
BF01049B1F01 82 3e-15
BF01044B1A07 68 4e-11
>BF01019A1H08
Length = 504
Score = 139 bits (70), Expect = 1e-32
Identities = 106/118 (89%)
Strand = Plus / Minus
Query: 766 ccttaaacctacacctgggtcgcaagtcccagaaactgctgaagctcctctccctgaaac 825
||||||||||||||||||||||||| |||||| |||| ||||||||||||||||| |||
Sbjct: 479 ccttaaacctacacctgggtcgcaactcccaggcactgttgaagctcctctccctgcaac 420
Query: 826 gcaatatacccggcacccgcccagtgaatacattgaatgctaagaggtttcgtctcat 883
|| || ||||||||||||| | |||||| ||||||||||||||||||||| ||||||
Sbjct: 419 gcgatggacccggcacccgcacggtgaatccattgaatgctaagaggtttcatctcat 362
>BF14_335_C2
Length = 1827
Score = 103 bits (52), Expect = 8e-22
Identities = 103/120 (85%)
Strand = Plus / Minus
Query: 767 cttaaacctacacctgggtcgcaagtcccagaaactgctgaagctcctctccctgaaacg 826
|||||||||||||||| ||||||| |||||| |||| ||||||||||||||||| ||||
Sbjct: 922 cttaaacctacacctgtgtcgcaaatcccaggcactgttgaagctcctctccctgcaacg 863
Query: 827 caatatacccggcacccgcccagtgaatacattgaatgctaagaggtttcgtctcattat 886
| ||||||||||||| | |||||| ||| ||| |||||||||||||||||| ||||
Sbjct: 862 cggcggacccggcacccgcacggtgaatccatagaaagctaagaggtttcgtctctttat 803
>BF14_335_C4
Length = 1491
Score = 91.7 bits (46), Expect = 3e-18
Identities = 101/118 (85%), Gaps = 1/118 (0%)
Strand = Plus / Plus
Query: 766 ccttaaacctacacctgggtcgcaagtcccagaaactgctgaagctcctctccctgaaac 825
|||||||||||||||||||||||||||||||| |||| |||||||||||| |||| |||
Sbjct: 1250 ccttaaacctacacctgggtcgcaagtcccaggcactgttgaagctcctct-cctgcaac 1308
Query: 826 gcaatatacccggcacccgcccagtgaatacattgaatgctaagaggtttcgtctcat 883
|| || ||| ||| |||| | |||||| ||| ||||||| |||| |||||||||||
Sbjct: 1309 gcgatggtccccgcaaccgcacggtgaatccatggaatgctgagagttttcgtctcat 1366
>BF01014B2F02
Length = 623
Score = 87.7 bits (44), Expect = 5e-17
Identities = 92/107 (85%), Gaps = 2/107 (1%)
Strand = Plus / Minus
Query: 775 tacacctgggtcgcaagtcccagaaactgctgaagctcctctccctgaaacgcaatatac 834
|||||||||||||||||||| || ||||||||||||||||||||| ||||| | ||
Sbjct: 623 tacacctgggtcgcaagtcctaggcgctgctgaagctcctctccctgcaacgc--tggac 566
Query: 835 ccggcacccgcccagtgaatacattgaatgctaagaggtttcgtctc 881
||||||||||| | ||| || || |||||||| ||||||||||||||
Sbjct: 565 ccggcacccgcacggtgcatccactgaatgctgagaggtttcgtctc 519
>BF01049B1F01
Length = 840
Score = 81.8 bits (41), Expect = 3e-15
Identities = 56/61 (91%)
Strand = Plus / Minus
Query: 766 ccttaaacctacacctgggtcgcaagtcccagaaactgctgaagctcctctccctgaaac 825
||||| |||||||||||||||||||||||||| |||| ||||||||||||||||| |||
Sbjct: 647 ccttacacctacacctgggtcgcaagtcccaggcactgttgaagctcctctccctgcaac 588
Query: 826 g 826
|
Sbjct: 587 g 587
>BF01044B1A07
Length = 806
Score = 67.9 bits (34), Expect = 4e-11
Identities = 85/102 (83%)
Strand = Plus / Minus
Query: 776 acacctgggtcgcaagtcccagaaactgctgaagctcctctccctgaaacgcaatatacc 835
|||||||| |||| ||||||||| || | ||||||||||||||||| |||| || |||
Sbjct: 532 acacctggttcgcgagtcccagacacagttgaagctcctctccctgccacgcgatggacc 473
Query: 836 cggcacccgcccagtgaatacattgaatgctaagaggtttcg 877
|| ||||||| | |||||| ||||||| ||| ||| ||||||
Sbjct: 472 cgccacccgcacggtgaatccattgaacgctgagaagtttcg 431
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 296,245
Number of extensions: 8182
Number of successful extensions: 8182
Number of sequences better than 1.0e-10: 6
Number of HSP's gapped: 8179
Number of HSP's successfully gapped: 6
Length of query: 1504
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1487
Effective length of database: 8,119,229
Effective search space: 12073293523
Effective search space used: 12073293523
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)