BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN20717 (UTR included)
(3007 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01019A1F01 1348 0.0
>BF01019A1F01
Length = 691
Score = 1348 bits (680), Expect = 0.0
Identities = 680/680 (100%)
Strand = Plus / Plus
Query: 1226 aactggttctaaaattgtggatatgataaaaaaggaatatttggaattagttagaactat 1285
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12 aactggttctaaaattgtggatatgataaaaaaggaatatttggaattagttagaactat 71
Query: 1286 aacattagatgcttataatattccatcactcatggaattaaattatgaacctgactgtag 1345
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 72 aacattagatgcttataatattccatcactcatggaattaaattatgaacctgactgtag 131
Query: 1346 tagcggtgcctgtaacgtagaacacaataaaactttgaatattaaaggcacgttgactgt 1405
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 132 tagcggtgcctgtaacgtagaacacaataaaactttgaatattaaaggcacgttgactgt 191
Query: 1406 caaatcctgtccagaaaacaaagaagtaacccattctcttatgattggacctttatcttt 1465
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 192 caaatcctgtccagaaaacaaagaagtaacccattctcttatgattggacctttatcttt 251
Query: 1466 aaacgaaaagttaaatattgagattgaaatagattgtgaatgtgaatgtgagaaagtgaa 1525
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 aaacgaaaagttaaatattgagattgaaatagattgtgaatgtgaatgtgagaaagtgaa 311
Query: 1526 aaatcgtgaagaaaattcaaaattatgcagcgaaaatggaacctatcaatgtggagtttg 1585
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 aaatcgtgaagaaaattcaaaattatgcagcgaaaatggaacctatcaatgtggagtttg 371
Query: 1586 taaatgcaatgaaaatagatctggcgatatttgtcaatgtgttggaaattcagttgatac 1645
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 taaatgcaatgaaaatagatctggcgatatttgtcaatgtgttggaaattcagttgatac 431
Query: 1646 gggagatcgaaataaatgcaaagcaaacaatgacattttcccatgtagtatgtttggtac 1705
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 gggagatcgaaataaatgcaaagcaaacaatgacattttcccatgtagtatgtttggtac 491
Query: 1706 ttgcagatgcggaaagtgcgaatgtccaaaaggattttctggagcttactgtgaatttaa 1765
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 492 ttgcagatgcggaaagtgcgaatgtccaaaaggattttctggagcttactgtgaatttaa 551
Query: 1766 tgataatgcatgtccaagtcctgggggtttgatatgcgcaggacacggtaactgcagttt 1825
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 552 tgataatgcatgtccaagtcctgggggtttgatatgcgcaggacacggtaactgcagttt 611
Query: 1826 tggaaggtgcatctgtgaacctcattggactggtgaaggttgtaaatgtcccgaaaatag 1885
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 612 tggaaggtgcatctgtgaacctcattggactggtgaaggttgtaaatgtcccgaaaatag 671
Query: 1886 gtgtatggcaccgtactccc 1905
||||||||||||||||||||
Sbjct: 672 gtgtatggcaccgtactccc 691
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 405,136
Number of extensions: 8480
Number of successful extensions: 8480
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 8480
Number of HSP's successfully gapped: 1
Length of query: 3007
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 2989
Effective length of database: 8,109,745
Effective search space: 24240027805
Effective search space used: 24240027805
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)