BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN20749 (UTR included)
(2821 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01054A2A07 1507 0.0
>BF01054A2A07
Length = 803
Score = 1507 bits (760), Expect = 0.0
Identities = 784/792 (98%)
Strand = Plus / Plus
Query: 1133 aaaacctacgccaatacagaaacatgctataccgatcatcatgaatggaagagatttgat 1192
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12 aaaacctacgccaatacagaaacatgctataccgatcatcatgaatggaagagatttgat 71
Query: 1193 gggctgcgctcaaactggttctgggaagactgcggcgtttcttcttcctattataaatac 1252
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 72 gggctgcgctcaaactggttctgggaaaactgcggcgtttcttcttcctattataaatac 131
Query: 1253 tctcttacaagatcttcgtgaactggtggtcggtccaaacggatgtgcgcagcctcaggt 1312
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 132 tctcttacaagatcttcgtgaactggtggtcggtccaaacggatgtgcgcagcctcaggt 191
Query: 1313 tgtaatagtagcccctacccgtgaattgacaatacaaatattcaacgaggccaggaaatt 1372
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 192 tgtaatagtagcccctacccgtgaattgacaatacaaatatttaacgaggccaggaaatt 251
Query: 1373 ctcttacggatccattttaaagatcgccgtggcatatggcggtacggctgtaagacatca 1432
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 252 ctcttacggatccattttaaagatcgctgtggcatatggcggtacggctgtaagacatca 311
Query: 1433 aggggataatatatctcgtggatgccacatcctggtagctacacctggtagacttcacga 1492
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 aggggataatatatctcgtggatgccacatcctggtagctacacctggtagacttcacga 371
Query: 1493 ttttgttgatcgtaaccgtgtgtcgttcgacagcgtgcgatttgtagtactggacgaggc 1552
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 ttttgttgatcgtaaccgcgtgtcgttcgacagcgtgcgatttgtagtactggacgaggc 431
Query: 1553 tgatcgtatgttggatatgggatttatgcccagtgttgagaagatgatggaccatcccac 1612
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 tgatcgtatgttggatatgggatttatgcccagtgttgagaagatgatggaccatcccac 491
Query: 1613 catggttaacattacagaacgtcaaacccttatgttttcggcaacatttcctgaagatat 1672
|||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 492 catggttaacataacagaacgtcaaacccttatgttttcggccacatttcctgaagatat 551
Query: 1673 ccaacatttggccggacgtttccttaataactatctttttgtggctgtgggagttgtcgg 1732
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 552 ccaacatttggccggacgtttcctaaataactatctttttgtggctgtgggagttgtcgg 611
Query: 1733 cggcgctagtacggatgttgaacaaatattccatcaagttattaagtacgaaaagcaaaa 1792
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 612 cggcgccagtacggatgttgaacaaatattccatcaagttattaagtacgaaaagcaaaa 671
Query: 1793 tactctaaagaaactcattgaagaaaatgatggcaaacgcatccttgtatttgtcgaaac 1852
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 672 tactctaaagaaactcattgaagaaaatgatggcaaacgcatccttgtatttgtcgaaac 731
Query: 1853 gaagcggaatgcggatttcatagcagctatgttgtctgaacaacagatgctcacatcttc 1912
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 732 gaagcggaatgcggatttcatagcagctatgttgtctgaacaacagatgctcacatcttc 791
Query: 1913 catacatggtga 1924
||||||||||||
Sbjct: 792 catacatggtga 803
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 330,729
Number of extensions: 6585
Number of successful extensions: 6585
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 6585
Number of HSP's successfully gapped: 1
Length of query: 2821
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2804
Effective length of database: 8,119,229
Effective search space: 22766318116
Effective search space used: 22766318116
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)