BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN20790 (UTR included)
(2644 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01029B1C10 1203 0.0
BF01031A1A12 646 0.0
>BF01029B1C10
Length = 715
Score = 1203 bits (607), Expect = 0.0
Identities = 628/635 (98%)
Strand = Plus / Plus
Query: 478 ataatacacatatattactcaaaatggttacaaaaaatgttaaaaaacctaaaactgaaa 537
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ataatacacatatattactcaaaatggttacaaaaaatgttaaaaaacctaaaactgaaa 60
Query: 538 aaccagatagacgcaaagataaaagcaacaaaatatgtaaaggaatgattgtgaatatat 597
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aaccagatagacgcaaagataaaagcaacaaaatatgtaaaggaatgattgtgaatatat 120
Query: 598 tgataagcatatactttactctccgctattatttggatatgttaatcgactacgcgtttt 657
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tgataagcatatactttactttccgctattatttggatatgttaatcgactacgcgtttt 180
Query: 658 cactttattgggatgaatatcgtcagcaattgccaaatttagagaaaaaacatgcaatgc 717
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 181 cactttattgggatgaatatcgtcaacaattgccaaatttagagaaaaaacatgcaatgc 240
Query: 718 ttatggaaagtgcagtgaaattagctgagaaaatacgaaaaaaagaactaaaatctgaag 777
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ttatggaaagtgcagtaaaattagctgagaaaatacgaaaaaaagaactaaaatctgaag 300
Query: 778 atcttgttactgcctgcattgagagaattaaacaggtcaatccaattctaaatgcggtaa 837
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 301 atcttgttactgcctgcattgagagaattaaacaggtgaatccaattctaaatgcggtaa 360
Query: 838 cagaccagagatttgaagaagctctgaaggaagctcgagaaattgataagaagattgaag 897
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 cagaccagagatttgaagaagctctgaaggaagctcgagaaattgataagaagattgaag 420
Query: 898 atggacttcccgatgaggaatttaagaacaaaccgttcttgggggtacctttcactgcca 957
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 acggacttcccgatgaggaatttaagaacaaaccgttcttgggggtacctttcactgcca 480
Query: 958 aggagtcccacgctgttaacgggatgctccacactctcggtgttcgagctcgtcgtgatg 1017
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 aggagtcccacgctgttaacgggatgctccacactctcggtgttcgagctcgtcgtgatg 540
Query: 1018 tccgcgccgagtacgatgcggagtgtgtgaggttgcttagagaggccggggctttgcccc 1077
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 tccgcgccgagtacgatgcggagtgtgtgaggttgcttagagaggccggggctttgcccc 600
Query: 1078 tcgctgttaccaacgtaccagaaatcaacaaatgg 1112
||||||| || ||||||||||||||||||||||||
Sbjct: 601 tcgctgtcactaacgtaccagaaatcaacaaatgg 635
>BF01031A1A12
Length = 591
Score = 646 bits (326), Expect = 0.0
Identities = 326/326 (100%)
Strand = Plus / Plus
Query: 2319 tgagaagaaatcttttaattcaatattaaaatcttttataatctgtccaccccctctccc 2378
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgagaagaaatcttttaattcaatattaaaatcttttataatctgtccaccccctctccc 60
Query: 2379 cgcccgcctccccgcaccctactgtagtaactatgcgttcaacgaattgactttacacta 2438
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 cgcccgcctccccgcaccctactgtagtaactatgcgttcaacgaattgactttacacta 120
Query: 2439 tccactacgcttagatataatttagactccgtatagtaacggtaatgttgacatcgagcg 2498
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tccactacgcttagatataatttagactccgtatagtaacggtaatgttgacatcgagcg 180
Query: 2499 acctatcaacctattaaactatttatcatctacatttgtacatcacatcgggtcgcgtca 2558
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 acctatcaacctattaaactatttatcatctacatttgtacatcacatcgggtcgcgtca 240
Query: 2559 ccgggcgccggccccagctgcgccgggccgtgcttcacaaacaataatacataacgggaa 2618
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ccgggcgccggccccagctgcgccgggccgtgcttcacaaacaataatacataacgggaa 300
Query: 2619 aagaacggcgggtgtgacgtcacgcg 2644
||||||||||||||||||||||||||
Sbjct: 301 aagaacggcgggtgtgacgtcacgcg 326
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 282,396
Number of extensions: 5656
Number of successful extensions: 5656
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 5656
Number of HSP's successfully gapped: 2
Length of query: 2644
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2627
Effective length of database: 8,119,229
Effective search space: 21329214583
Effective search space used: 21329214583
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)