BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN20801 (UTR included)
(1774 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_2698_C1 775 0.0
>BF14_2698_C1
Length = 952
Score = 775 bits (391), Expect = 0.0
Identities = 404/407 (99%), Gaps = 1/407 (0%)
Strand = Plus / Plus
Query: 1 attgtttaaagaaataatattcacatgtttaatttctagaggcaaacaagataaaatttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 406 attgtttaaagaaataatattcacatgtttaatttctagaggcaaacaagataaaatttt 465
Query: 61 aattttttagcgtacttttagtaagaacttattttgaagtttcaatataggtatgtgaat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 466 aattttttagcgtacttttagtaagaacttattttgaagtttcaatataggtatgtgaat 525
Query: 121 atgcatcaacatattatttctttaaacctgttttaaaa-aatacaataaaaactatagaa 179
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 526 atgcatcaacatattatttctttaaacctgttttaaaaaaatacaataaaaactatagaa 585
Query: 180 atgaggtagtactttcagtaattgtcagattaataacaacacttcttatttatttcgcta 239
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 586 atgaggtagtactttcagtaattgtcagatcaataacaacacttcttatttatttcgcta 645
Query: 240 atatattaaggtttaggaagaatacagaattgcatgtagatataatggatacttgggtat 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 646 atatattaaggtttaggaagaatacagaattgcatgtagatataatggatacttgggtat 705
Query: 300 tgggtgtatgactgttgcaatggaaatatgcttgtaaacaaagtttcatataatcttaag 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 706 tgggtgtatgactgttgcaatggaaatatgcttgtaaacaaagtttcatataatcttaag 765
Query: 360 ggtgtggatacaatataagatgacttcgtttaatatatacatattta 406
|||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 766 ggtgtggatacaatataagatgacttcgcttaatatatacatattta 812
Score = 238 bits (120), Expect = 2e-62
Identities = 123/124 (99%)
Strand = Plus / Plus
Query: 396 atacatatttaaatgaagcatgtaattttgtgttgagtatattacaaaacacacaataaa 455
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 829 atacatatttaaatgaagcatgtaattttgtgttgagtatattacaaaacacacaataaa 888
Query: 456 atttagatttattataatgtcaagaaattaactcacacaggtatcatgttcgcaaataaa 515
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 889 atttagatttattataatgtcaagaaattaactcacacaggtatcatgttcacaaataaa 948
Query: 516 gttg 519
||||
Sbjct: 949 gttg 952
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 284,763
Number of extensions: 6484
Number of successful extensions: 6484
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 6483
Number of HSP's successfully gapped: 2
Length of query: 1774
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1757
Effective length of database: 8,119,229
Effective search space: 14265485353
Effective search space used: 14265485353
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)