BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN20829 (UTR included)
(1384 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01047B2H03 131 3e-30
BF01031B2E06 84 7e-16
BF14_335_C2 70 1e-11
>BF01047B2H03
Length = 758
Score = 131 bits (66), Expect = 3e-30
Identities = 202/246 (82%), Gaps = 1/246 (0%)
Strand = Plus / Minus
Query: 417 gatagggttttagacatcatacgtgaagcggttatcctttccgtagccagagcgcacaaa 476
|||||||||||| | |||||| ||||||||||| ||| |||| || ||| | |||
Sbjct: 267 gatagggttttaaatttcatacatgaagcggttagtattttggtagtcattgcggaaaaa 208
Query: 477 gaaatttccacaaacaagctatcaatggcttttgtgagagaagacgctagggcttcaaaa 536
||||| |||||||| || || ||| | |||||||||||||||| ||||||| |||
Sbjct: 207 gaaataaccacaaacgggcgattaattggttttgtgagagaagacattagggctataaag 148
Query: 537 tcaaaggtcaagccttactctatcattaaaacggcttcggattggactataatgatagat 596
||||| ||||||||||||||||| ||||| ||| ||||||||| |||||||| || |||
Sbjct: 147 tcaaacatcaagccttactctatccttaaagcggtttcggattgcactataatcatggat 88
Query: 597 acgtatgaggaacgatacaaaatcccagagtatatttgtgcgggggtctccagaccagac 656
||||||| |||||||||||||||||| ||| ||| ||||| | ||| ||||||||||||
Sbjct: 87 acgtatggggaacgatacaaaatccccgagcata-ttgtgtgtcggtttccagaccagac 29
Query: 657 aaattt 662
| ||||
Sbjct: 28 atattt 23
>BF01031B2E06
Length = 707
Score = 83.8 bits (42), Expect = 7e-16
Identities = 132/164 (80%), Gaps = 11/164 (6%)
Strand = Plus / Plus
Query: 717 gaaaccaacaaacccaaagaccatgccatcaaggtcaataagtattacgaattcactaac 776
|||||||||| ||||||||||||||||||||| ||||||||||||||||
Sbjct: 436 gaaaccaacatccccaaagaccatgccatcaagatcaataagtattacga---------- 485
Query: 777 gaactctctaggattaggttcgtcgttgatttgtacgcggtagaagtgggagtgagaggt 836
| ||| ||| || ||||||||| | |||||||||||||||||||||||| ||| | |
Sbjct: 486 -agctcactaagaataggttcgtggcaaatttgtacgcggtagaagtgggagcgagcgtt 544
Query: 837 ataacaactaaatctttctacaacctactaaaagacttgggcct 880
||| | |||||||| || |||||||||||||| |||||||||
Sbjct: 545 gtaaaagctaaatctctccacaacctactaaaaaccttgggcct 588
>BF14_335_C2
Length = 1827
Score = 69.9 bits (35), Expect = 1e-11
Identities = 47/51 (92%)
Strand = Plus / Minus
Query: 830 gagaggtataacaactaaatctttctacaacctactaaaagacttgggcct 880
||||||||||||| |||||||| |||||| |||||||||| ||||||||||
Sbjct: 1107 gagaggtataacagctaaatctctctacagcctactaaaatacttgggcct 1057
Score = 67.9 bits (34), Expect = 4e-11
Identities = 61/70 (87%)
Strand = Plus / Minus
Query: 694 taatagagctcacggtttcttgggaaaccaacaaacccaaagaccatgccatcaaggtca 753
||||||||| |||||| ||||| | ||||||| |||||| ||||||||||||||||||
Sbjct: 1238 taatagagcctacggttccttggaagaccaacatccccaaaaaccatgccatcaaggtca 1179
Query: 754 ataagtatta 763
| ||||||||
Sbjct: 1178 acaagtatta 1169
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 253,404
Number of extensions: 20179
Number of successful extensions: 20179
Number of sequences better than 1.0e-10: 3
Number of HSP's gapped: 20178
Number of HSP's successfully gapped: 5
Length of query: 1384
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1367
Effective length of database: 8,119,229
Effective search space: 11098986043
Effective search space used: 11098986043
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)