BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN20835 (UTR included)
(1516 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_1870_C1 1409 0.0
>BF14_1870_C1
Length = 733
Score = 1409 bits (711), Expect = 0.0
Identities = 727/731 (99%), Gaps = 1/731 (0%)
Strand = Plus / Plus
Query: 113 tttgtgggcaatggtttaaattagagcaaatattttgataaaggctaaacatattccacg 172
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3 tttgtgggcaatggtttaaattagagcaaatattttgataaaggctaaacatattccacg 62
Query: 173 -ttttttataaattggactagtatatattgatacttacagtgtaagaattattaaatact 231
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 63 nttttttataaattggactagtatatattgatacttacagtataagaattattaaatact 122
Query: 232 ggaagactctttgaaacctagaacattacatcggttagctgcagtgatttacatcattct 291
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123 ggaagactctttgaaacctagaacattacatcggttagctgcagtgatttacatcattct 182
Query: 292 tttcttaatgcattggtgcagtggaaaatagtgttgattgtgatcatttgttatgttatt 351
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 183 tttcttaatgcattggtgcagtggaaaatagtgttgattgtgatcatttgttatgttatt 242
Query: 352 acttggatgttttaaaaatggttagtgttattgccagtcataacctcaaccctgaggctt 411
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 243 acttggatgttttaaaaatggttagtgttattgccagtcataacctcaaccctgaggctt 302
Query: 412 gatacgtcgaactattctgtgtcgacccgtgcgaggtgttgcgctctatatagaactatc 471
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 gatacgtcgaactattctgtgtcgacccgtgcgaggtgttgcgctctatatagaactatc 362
Query: 472 tgttatatatgattcaacgggagtatccaatgaacaacgggtttagtacaggagaagaag 531
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363 tgttatatatgattcaacgggagtatccaatgaacaacgggtttagtacaggagaagaag 422
Query: 532 attctagaggtaattccgatcaaatatgttgcctagtggatgacagtgatcgatgtaggc 591
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 423 attctagaagtaattccgatcaaatatgttgcctagtggatgacagtgatcgatgtaggc 482
Query: 592 gacccgctggcaatgcatcgtacggtaaacgcatacagagaaatgttaagaggctcaaac 651
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 483 gacccgctggcaatgcatcgtacggtaaacgcatacagagaaatgttaagaggctcaaac 542
Query: 652 tcaatatcgactcacaggcaagacatacatatatctgtgatcaccataaaaaaatgatac 711
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 543 tcaatatcgactcccaggcaagacatacatatatctgtgatcaccataaaaaaatgatac 602
Query: 712 aagatgcaagagcaaaacaaaggaggcccaaggattccgaagatgatagtaatgaagtag 771
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 603 aagatgcaagagcaaaacaaaggaggcccaaggattccgaagatgatagtaatgaagtag 662
Query: 772 agatggaagccccagaagtggactggtttcaattgcaagtgaatactcttaggcggtaca 831
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 663 agatggaagccccagaagtggactggtttcaattgcaagtgaatactcttaggcggtaca 722
Query: 832 aaagacattat 842
|||||||||||
Sbjct: 723 aaagacattat 733
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 193,066
Number of extensions: 3878
Number of successful extensions: 3878
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 3877
Number of HSP's successfully gapped: 1
Length of query: 1516
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1499
Effective length of database: 8,119,229
Effective search space: 12170724271
Effective search space used: 12170724271
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)