BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN20841 (UTR included)
(1312 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01042B2F03 1380 0.0
>BF01042B2F03
Length = 781
Score = 1380 bits (696), Expect = 0.0
Identities = 740/751 (98%), Gaps = 9/751 (1%)
Strand = Plus / Plus
Query: 265 aatttttgttccttcaaataaccacaaatcacatttaacgatctgcgatcgattatcttt 324
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 35 aatttttgttccttcaaataaccacaaatca--tttaacgatctgcgatcgattatcttt 92
Query: 325 tggaaattttgtaataatttttatctaaacgttttggtgaatcgattattccgattaaaa 384
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 93 tggaaattttgtaataatttttatctaaacgttttggtgaatcgattattccgattaaaa 152
Query: 385 caacatttgcttcgaatttcacatcgattatttaaacatccttattttttttttcgtggt 444
||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||
Sbjct: 153 caacatttgcttcgaatttcacatcgatt-tttaaacatccttatttt-tttttcgtggt 210
Query: 445 aatcaacttactgtctaatgggtctattttccagcaaaattgctcgtgcttcaaaaatgg 504
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 211 aatcaactcactgtctaatgggtctattttccagcaaaattgctcgtgcttcaaaaatgg 270
Query: 505 cgaactctgccgaaattcaacaatttattaaagatgctatatctcaagaaaaagttgtag 564
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 271 cgaactctgccgaaattcaacaatttattaaagatgctatatctcaagaaaaagttgtag 330
Query: 565 ttttttcaaaatcgtattgtccttactgtacactggcgaaagatgtattcagcaaagtga 624
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 331 ttttttcaaaatcgtattgtccttactgtacactggcgaaagatgtattcagcaaagtga 390
Query: 625 agcagccgataaaagtatacgagttagatgagagagaagacggctcagtcatccaagaaa 684
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 391 agcagccgataaaagtatacgagttagatgagagagaagacggctcagtcatccaagaaa 450
Query: 685 accttaaaaaaattacaggatttggaacggtacctcaagtgtttatcaacggcaactgtg 744
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 451 accttaaaaaaattacaggatttggaacggtacctcaagtgtttatcaacggcaactgtg 510
Query: 745 tcggtggtggttctgatgtaaaaaatctttatgattctggaaaattagaacctatgctca 804
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 511 tcggtggtggttctgatgtaaaaaatctttatgattctggaaaattagaacctatgctca 570
Query: 805 ttggataacatcttatagtcaaataacagatatagtacataaaaatataatacaagtgtc 864
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 571 ttggataacatcttatagtcaaataacagatatagtacataaaaatataatacaagtgtc 630
Query: 865 aaattatttaaaatattaagaatatttaatttctatgcattttaaagg-----ctgtact 919
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 631 aaattatttaaaatattaagaatatttaatttctatgcattttaaaggctgtactgtact 690
Query: 920 tatatccgatgcaacaaattagatttgttaaagtcaaaatcataataaaaaaccattttg 979
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 691 tatatccgatgcaacaaattagatttgttaaaatcaaaatcataataaaaaaccattttg 750
Query: 980 aatggaacttttggtaaattgcaatgctttt 1010
|||||||||||||||||||||||||||||||
Sbjct: 751 aatggaacttttggtaaattgcaatgctttt 781
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 262,998
Number of extensions: 6606
Number of successful extensions: 6606
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 6602
Number of HSP's successfully gapped: 1
Length of query: 1312
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1295
Effective length of database: 8,119,229
Effective search space: 10514401555
Effective search space used: 10514401555
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)