BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN20849 (UTR included)
(2635 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01011A1H06 100 2e-20
BF01025B2E05 96 3e-19
BF01052B1F12 92 5e-18
BF01056A1B08 84 1e-15
BF01012A1E04 84 1e-15
BF14_729_C2 84 1e-15
BF01012A1B09 80 2e-14
BF14_729_C3 80 2e-14
BF14_1695_C1 76 3e-13
BF01049A2D11 72 5e-12
BF01061B1E05 70 2e-11
BF01049B2H03 70 2e-11
>BF01011A1H06
Length = 739
Score = 99.6 bits (50), Expect = 2e-20
Identities = 59/62 (95%)
Strand = Plus / Minus
Query: 2503 taatgagatctaagattttcgcgagttttattcatttaaatgaaactagtattgttcgga 2562
|||||||||||||||||||||||| ||||||||||||||||||| |||||||| ||||||
Sbjct: 608 taatgagatctaagattttcgcgacttttattcatttaaatgaatctagtatttttcgga 549
Query: 2563 ta 2564
||
Sbjct: 548 ta 547
>BF01025B2E05
Length = 759
Score = 95.6 bits (48), Expect = 3e-19
Identities = 51/52 (98%)
Strand = Plus / Minus
Query: 2503 taatgagatctaagattttcgcgagttttattcatttaaatgaaactagtat 2554
||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 121 taatgagatctaagactttcgcgagttttattcatttaaatgaaactagtat 70
>BF01052B1F12
Length = 785
Score = 91.7 bits (46), Expect = 5e-18
Identities = 58/62 (93%)
Strand = Plus / Plus
Query: 2505 atgagatctaagattttcgcgagttttattcatttaaatgaaactagtattgttcggata 2564
|||| |||||||| |||||||||||||||||||||||||||||||| |||| ||||||||
Sbjct: 297 atgaaatctaagaatttcgcgagttttattcatttaaatgaaactaatatttttcggata 356
Query: 2565 ta 2566
||
Sbjct: 357 ta 358
>BF01056A1B08
Length = 761
Score = 83.8 bits (42), Expect = 1e-15
Identities = 45/46 (97%)
Strand = Plus / Plus
Query: 2505 atgagatctaagattttcgcgagttttattcatttaaatgaaacta 2550
||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 96 atgagatctaagactttcgcgagttttattcatttaaatgaaacta 141
>BF01012A1E04
Length = 841
Score = 83.8 bits (42), Expect = 1e-15
Identities = 58/62 (93%), Gaps = 1/62 (1%)
Strand = Plus / Minus
Query: 2506 tgagatctaagattttcgcgagttttattcatttaaatgaaactagtat-tgttcggata 2564
|||||||||||| |||||||||||||||||||||||||||||||| ||| | ||||||||
Sbjct: 618 tgagatctaagactttcgcgagttttattcatttaaatgaaactaatatattttcggata 559
Query: 2565 ta 2566
||
Sbjct: 558 ta 557
>BF14_729_C2
Length = 1289
Score = 83.8 bits (42), Expect = 1e-15
Identities = 57/62 (91%)
Strand = Plus / Minus
Query: 2503 taatgagatctaagattttcgcgagttttattcatttaaatgaaactagtattgttcgga 2562
||||||||||||||| |||||| ||||||| |||||||||||||||||| ||| ||||||
Sbjct: 676 taatgagatctaagactttcgccagttttaatcatttaaatgaaactagaattattcgga 617
Query: 2563 ta 2564
||
Sbjct: 616 ta 615
>BF01012A1B09
Length = 841
Score = 79.8 bits (40), Expect = 2e-14
Identities = 55/60 (91%)
Strand = Plus / Plus
Query: 2505 atgagatctaagattttcgcgagttttattcatttaaatgaaactagtattgttcggata 2564
||||||||||||| | |||||||||||||||||||||||||||||| ||| ||||||||
Sbjct: 705 atgagatctaagactgtcgcgagttttattcatttaaatgaaactaatatatttcggata 764
>BF14_729_C3
Length = 2041
Score = 79.8 bits (40), Expect = 2e-14
Identities = 57/62 (91%), Gaps = 3/62 (4%)
Strand = Plus / Minus
Query: 2505 atgagatctaagattttcgcgagttttattcatttaaatgaaactagtattgttcggata 2564
|||||||||||||||||||||||| ||||||||||||||| |||||||| ||||||||
Sbjct: 1729 atgagatctaagattttcgcgagt---attcatttaaatgaagctagtattattcggata 1673
Query: 2565 ta 2566
||
Sbjct: 1672 ta 1671
>BF14_1695_C1
Length = 1407
Score = 75.8 bits (38), Expect = 3e-13
Identities = 49/52 (94%), Gaps = 3/52 (5%)
Strand = Plus / Plus
Query: 2502 gtaatgagatctaagattttcgcgagttttattcatttaaatgaaactagta 2553
|||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 1019 gtaatgagatctaagattttcgcgag---tattcatttaaatgaaactagta 1067
>BF01049A2D11
Length = 776
Score = 71.9 bits (36), Expect = 5e-12
Identities = 36/36 (100%)
Strand = Plus / Plus
Query: 2503 taatgagatctaagattttcgcgagttttattcatt 2538
||||||||||||||||||||||||||||||||||||
Sbjct: 467 taatgagatctaagattttcgcgagttttattcatt 502
>BF01061B1E05
Length = 745
Score = 69.9 bits (35), Expect = 2e-11
Identities = 46/49 (93%), Gaps = 3/49 (6%)
Strand = Plus / Minus
Query: 2506 tgagatctaagattttcgcgagttttattcatttaaatgaaactagtat 2554
||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 54 tgagatctaagattttcgcgagt---attcatttaaatgaaactagtat 9
>BF01049B2H03
Length = 832
Score = 69.9 bits (35), Expect = 2e-11
Identities = 55/61 (90%), Gaps = 3/61 (4%)
Strand = Plus / Minus
Query: 2503 taatgagatctaagattttcgcgagttttattcatttaaatgaaactagtattgttcgga 2562
||||||||||||||||||| |||||| ||||||||||||||||||| |||| ||||||
Sbjct: 354 taatgagatctaagattttagcgagt---attcatttaaatgaaactaatatttttcgga 298
Query: 2563 t 2563
|
Sbjct: 297 t 297
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 345,547
Number of extensions: 7806
Number of successful extensions: 7806
Number of sequences better than 1.0e-10: 12
Number of HSP's gapped: 7802
Number of HSP's successfully gapped: 12
Length of query: 2635
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2618
Effective length of database: 8,119,229
Effective search space: 21256141522
Effective search space used: 21256141522
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)