BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN20852 (UTR included)
(1327 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01012A1C02 1287 0.0
>BF01012A1C02
Length = 847
Score = 1287 bits (649), Expect = 0.0
Identities = 680/690 (98%), Gaps = 1/690 (0%)
Strand = Plus / Plus
Query: 470 ggctagttccgtcatactagcgggtcttgggatggctgcagtcggctttgcaggtcgtta 529
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 158 ggctagttccgtcatactagcgggtcttgggatggctgcagtcggctttgcaggtcgtta 217
Query: 530 tattcttaggcagataccaaatgcgtcgtcgaaatttgccgaagcaatgaaaaatttacc 589
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 218 tattcttaggcagataccaaatgcgtcgtcgaaatttgccgaagcaatgaaaaatttacc 277
Query: 590 caaatttgattcagagtccttggcgaattcaaaatattataagggaggttttgagcctaa 649
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 278 caaatttgattcagagtccttggcgaattcaaaatattataagggaggttttgagcctaa 337
Query: 650 gatgacgaaaagagaagcggctttgattttgggtgttagtccaacagccaataaaactaa 709
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 338 gatgacgaaaagagaagcggctttgattttgggtgttagtccaaccgccaataaaactaa 397
Query: 710 gattcgtgaagctcacagaagaattatgttattgaatcacccagacaaaggaggatctcc 769
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 398 gattcgcgaagctcacagaagaattatgttattgaatcacccagacaaaggaggatctcc 457
Query: 770 actcattgcagcaaaaattaatgaggcaaaagatatgcttgaaagtggaaaatcatgagc 829
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 458 actcattgcagcaaaaattaatgaggcaaaagatatgcttgaaagtggaaaatcatgagc 517
Query: 830 ttaaccaaatagtgccattctgatattaaagtcatgcacaactgatgttgctactatata 889
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 518 ttaaccaaataatgccattctgatattaaagtcatgcacaactgatgttgctactatata 577
Query: 890 taacagtttaggggcccgtcactagatcaattataggacaaaacattgttagaaataaag 949
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 578 taacagtttaggggcccgtcactagatcaattataggacaaaacattgttagaaataaag 637
Query: 950 acagttctcaacaacttcataatttattctaatacaaagacttcttataacatgtattaa 1009
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 638 acagttctcaacaacttcataatttattctaatacaaagacttcttataacatgtattaa 697
Query: 1010 agaacatcactaacacacagattattcattaagcaaagtcattattaagcaaagcttaga 1069
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 698 agaacatcactaacacactgattattcattaagcaaagtcattattaagcaaagcttaga 757
Query: 1070 accacatacatattacaa-gaaaaagtaattgttttatatttttaaaaaaattgattaga 1128
|||||||||||||||||| |||||||||||||||||||||||||||||| |||||||
Sbjct: 758 accacatacatattacaannnnaaagtaattgttttatatttttaaaaaaatcgattaga 817
Query: 1129 aaaatacataggtacatatagtattttatg 1158
||||||||||||||||||| ||||||||||
Sbjct: 818 aaaatacataggtacatatggtattttatg 847
Score = 276 bits (139), Expect = 9e-74
Identities = 154/159 (96%)
Strand = Plus / Plus
Query: 237 gttctagcatttttcagtattttccaagcaaggaaactttaaaaaaaatattttaataaa 296
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gttctaccatttttcagtattttccaagcaaggaaactttaaaaaaaatattttaataaa 60
Query: 297 atataataatgcttatgtaatgcaaaaatctatagaagaattggaacttgtaattgagaa 356
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 61 atataataatgcttatgtaatgcaaaaatctatagaagaattggaacttgctattgagaa 120
Query: 357 aattatatactagcttcctcaatagaccgtcgaaaatgg 395
||| ||||||||||||||||||||||||||||||||||
Sbjct: 121 aatattatactagcttcctcaatagaccgtcgaaaatgg 159
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 234,690
Number of extensions: 5952
Number of successful extensions: 5952
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 5951
Number of HSP's successfully gapped: 2
Length of query: 1327
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1310
Effective length of database: 8,119,229
Effective search space: 10636189990
Effective search space used: 10636189990
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)